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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Vigna angularis (40) | Vang0010ss00350.1 | GATA family protein |
Vang0017s00340.1 | GATA family protein | |
Vang0017s00340.2 | GATA family protein | |
Vang0021ss02170.1 | GATA family protein | |
Vang0064ss00450.1 | GATA family protein | |
Vang0064ss00450.2 | GATA family protein | |
Vang0069ss01820.1 | GATA family protein | |
Vang0164s00420.1 | GATA family protein | |
Vang01g08240.1 | GATA family protein | |
Vang01g09310.1 | GATA family protein | |
Vang01g12050.1 | GATA family protein | |
Vang01g17830.1 | GATA family protein | |
Vang0268s00180.1 | GATA family protein | |
Vang0268s00180.2 | GATA family protein | |
Vang0268s00180.3 | GATA family protein | |
Vang05g00340.1 | GATA family protein | |
Vang05g00340.2 | GATA family protein | |
Vang05g00340.3 | GATA family protein | |
Vang05g00830.1 | GATA family protein | |
Vang05g04170.1 | GATA family protein | |
Vang05g09970.1 | GATA family protein | |
Vang0692s00050.1 | GATA family protein | |
Vang0692s00050.2 | GATA family protein | |
Vang06g07490.1 | GATA family protein | |
Vang06g20670.1 | GATA family protein | |
Vang06g20670.2 | GATA family protein | |
Vang06g20670.3 | GATA family protein | |
Vang06g20670.4 | GATA family protein | |
Vang07g01220.1 | GATA family protein | |
Vang07g01810.1 | GATA family protein | |
Vang07g01810.2 | GATA family protein | |
Vang07g01810.3 | GATA family protein | |
Vang09g05860.1 | GATA family protein | |
Vang1023s00020.1 | GATA family protein | |
Vang10g03510.1 | GATA family protein | |
Vang11g02440.1 | GATA family protein | |
Vang11g02850.1 | GATA family protein | |
Vang11g05690.1 | GATA family protein | |
Vang11g13200.1 | GATA family protein | |
Vang11g16720.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008