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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
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678294985 | GATA family protein | |
678294995 | GATA family protein | |
678300249 | GATA family protein | |
678305049 | GATA family protein | |
678318192 | GATA family protein | |
678333240 | GATA family protein | |
678345813 | GATA family protein | |
678357849 | GATA family protein | |
678367062 | GATA family protein | |
678370550 | GATA family protein | |
678374276 | GATA family protein | |
678397060 | GATA family protein | |
678397573 | GATA family protein | |
678411319 | GATA family protein | |
678413623 | GATA family protein | |
678418073 | GATA family protein | |
678423460 | GATA family protein | |
678434062 | GATA family protein | |
678436775 | GATA family protein | |
678437992 | GATA family protein | |
678441204 | GATA family protein | |
678444218 | GATA family protein | |
678451683 | GATA family protein | |
678455836 | GATA family protein | |
678456691 | GATA family protein | |
678458394 | GATA family protein | |
678460569 | GATA family protein | |
678465147 | GATA family protein | |
678466138 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008