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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
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Tp1g06640 | GATA family protein | |
Tp1g38240 | GATA family protein | |
Tp2g11950 | GATA family protein | |
Tp2g19650 | GATA family protein | |
Tp2g21100 | GATA family protein | |
Tp2g21790 | GATA family protein | |
Tp2g30170 | GATA family protein | |
Tp3g05710 | GATA family protein | |
Tp3g15120 | GATA family protein | |
Tp3g18770 | GATA family protein | |
Tp3g19150 | GATA family protein | |
Tp3g21910 | GATA family protein | |
Tp3g31790 | GATA family protein | |
Tp4g11130 | GATA family protein | |
Tp4g27110 | GATA family protein | |
Tp5g02690 | GATA family protein | |
Tp5g07630 | GATA family protein | |
Tp5g11130 | GATA family protein | |
Tp5g11350 | GATA family protein | |
Tp5g16140 | GATA family protein | |
Tp6g18580 | GATA family protein | |
Tp7g14610 | GATA family protein | |
Tp7g16590 | GATA family protein | |
Tp7g22450 | GATA family protein | |
Tp7g23190 | GATA family protein | |
Tp7g24170 | GATA family protein | |
Tp7g30660 | GATA family protein | |
Tp7g32470 | GATA family protein | |
Tp7g33980 | GATA family protein | |
Tp7g34270 | GATA family protein | |
Tp_un0030_004 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008