PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
---|---|---|
Sopen01g026800.1 | GATA family protein | |
Sopen01g036490.1 | GATA family protein | |
Sopen01g046870.1 | GATA family protein | |
Sopen01g046890.1 | GATA family protein | |
Sopen01g046900.1 | GATA family protein | |
Sopen01g046900.2 | GATA family protein | |
Sopen01g048410.1 | GATA family protein | |
Sopen01g048420.1 | GATA family protein | |
Sopen01g048420.2 | GATA family protein | |
Sopen01g050640.2 | GATA family protein | |
Sopen01g052460.1 | GATA family protein | |
Sopen02g013380.1 | GATA family protein | |
Sopen02g013790.1 | GATA family protein | |
Sopen02g029260.1 | GATA family protein | |
Sopen02g029890.1 | GATA family protein | |
Sopen03g006450.1 | GATA family protein | |
Sopen03g039720.1 | GATA family protein | |
Sopen04g007430.1 | GATA family protein | |
Sopen04g030260.1 | GATA family protein | |
Sopen05g032000.1 | GATA family protein | |
Sopen05g032880.1 | GATA family protein | |
Sopen05g032880.2 | GATA family protein | |
Sopen05g034530.1 | GATA family protein | |
Sopen06g021080.1 | GATA family protein | |
Sopen06g031550.1 | GATA family protein | |
Sopen07g018310.1 | GATA family protein | |
Sopen08g003140.1 | GATA family protein | |
Sopen08g020340.1 | GATA family protein | |
Sopen08g026470.1 | GATA family protein | |
Sopen09g030410.1 | GATA family protein | |
Sopen09g034220.1 | GATA family protein | |
Sopen10g008320.1 | GATA family protein | |
Sopen10g018050.1 | GATA family protein | |
Sopen10g018050.2 | GATA family protein | |
Sopen11g028220.1 | GATA family protein | |
Sopen12g003760.1 | GATA family protein | |
Sopen12g034040.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008