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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Panicum virgatum (104) | Pavir.1KG015400.1.p | GATA family protein |
Pavir.1KG015400.2.p | GATA family protein | |
Pavir.1KG029600.1.p | GATA family protein | |
Pavir.1KG192800.1.p | GATA family protein | |
Pavir.1KG192800.3.p | GATA family protein | |
Pavir.1KG413300.1.p | GATA family protein | |
Pavir.1KG534500.1.p | GATA family protein | |
Pavir.1KG534500.2.p | GATA family protein | |
Pavir.1NG042700.1.p | GATA family protein | |
Pavir.1NG098400.1.p | GATA family protein | |
Pavir.1NG116900.1.p | GATA family protein | |
Pavir.1NG261300.1.p | GATA family protein | |
Pavir.1NG372500.1.p | GATA family protein | |
Pavir.1NG382700.1.p | GATA family protein | |
Pavir.1NG499000.1.p | GATA family protein | |
Pavir.1NG499000.2.p | GATA family protein | |
Pavir.1NG499000.3.p | GATA family protein | |
Pavir.1NG499000.4.p | GATA family protein | |
Pavir.1NG499000.5.p | GATA family protein | |
Pavir.2KG137100.1.p | GATA family protein | |
Pavir.2NG109600.1.p | GATA family protein | |
Pavir.2NG111800.1.p | GATA family protein | |
Pavir.2NG215300.1.p | GATA family protein | |
Pavir.3KG136500.1.p | GATA family protein | |
Pavir.3KG168200.1.p | GATA family protein | |
Pavir.3KG172600.1.p | GATA family protein | |
Pavir.3KG172600.2.p | GATA family protein | |
Pavir.3KG214400.1.p | GATA family protein | |
Pavir.3KG310500.1.p | GATA family protein | |
Pavir.3KG338800.1.p | GATA family protein | |
Pavir.3KG340600.1.p | GATA family protein | |
Pavir.3KG556300.1.p | GATA family protein | |
Pavir.3KG556300.2.p | GATA family protein | |
Pavir.3NG029100.1.p | GATA family protein | |
Pavir.3NG029100.2.p | GATA family protein | |
Pavir.3NG029100.3.p | GATA family protein | |
Pavir.3NG271500.1.p | GATA family protein | |
Pavir.4KG286000.1.p | GATA family protein | |
Pavir.4KG288700.1.p | GATA family protein | |
Pavir.4KG377700.1.p | GATA family protein | |
Pavir.4KG377700.2.p | GATA family protein | |
Pavir.4NG310300.1.p | GATA family protein | |
Pavir.4NG310300.2.p | GATA family protein | |
Pavir.4NG310300.3.p | GATA family protein | |
Pavir.5KG230300.1.p | GATA family protein | |
Pavir.5KG230300.2.p | GATA family protein | |
Pavir.5KG422600.1.p | GATA family protein | |
Pavir.5KG547300.1.p | GATA family protein | |
Pavir.5NG011100.1.p | GATA family protein | |
Pavir.5NG348800.1.p | GATA family protein | |
Pavir.5NG419100.1.p | GATA family protein | |
Pavir.5NG492700.1.p | GATA family protein | |
Pavir.5NG606200.1.p | GATA family protein | |
Pavir.5NG606200.2.p | GATA family protein | |
Pavir.7KG219200.1.p | GATA family protein | |
Pavir.7KG219200.2.p | GATA family protein | |
Pavir.7KG268200.1.p | GATA family protein | |
Pavir.7KG268200.2.p | GATA family protein | |
Pavir.7KG268200.3.p | GATA family protein | |
Pavir.7KG268200.4.p | GATA family protein | |
Pavir.7KG272800.1.p | GATA family protein | |
Pavir.7NG219200.1.p | GATA family protein | |
Pavir.7NG219200.2.p | GATA family protein | |
Pavir.7NG220500.1.p | GATA family protein | |
Pavir.7NG220500.2.p | GATA family protein | |
Pavir.7NG264500.1.p | GATA family protein | |
Pavir.7NG267700.1.p | GATA family protein | |
Pavir.7NG288300.1.p | GATA family protein | |
Pavir.7NG305400.1.p | GATA family protein | |
Pavir.7NG305400.10.p | GATA family protein | |
Pavir.7NG305400.2.p | GATA family protein | |
Pavir.7NG305400.3.p | GATA family protein | |
Pavir.7NG305400.4.p | GATA family protein | |
Pavir.7NG305400.5.p | GATA family protein | |
Pavir.7NG305400.6.p | GATA family protein | |
Pavir.7NG305400.7.p | GATA family protein | |
Pavir.7NG305400.8.p | GATA family protein | |
Pavir.7NG305400.9.p | GATA family protein | |
Pavir.8KG084800.1.p | GATA family protein | |
Pavir.8KG092000.1.p | GATA family protein | |
Pavir.8KG174000.1.p | GATA family protein | |
Pavir.8NG084100.1.p | GATA family protein | |
Pavir.9KG048100.1.p | GATA family protein | |
Pavir.9KG211300.1.p | GATA family protein | |
Pavir.9KG327600.1.p | GATA family protein | |
Pavir.9KG585300.1.p | GATA family protein | |
Pavir.9NG114400.1.p | GATA family protein | |
Pavir.9NG114400.2.p | GATA family protein | |
Pavir.9NG114400.3.p | GATA family protein | |
Pavir.9NG114400.4.p | GATA family protein | |
Pavir.9NG157100.1.p | GATA family protein | |
Pavir.9NG157100.2.p | GATA family protein | |
Pavir.9NG201100.1.p | GATA family protein | |
Pavir.9NG201100.2.p | GATA family protein | |
Pavir.9NG202200.1.p | GATA family protein | |
Pavir.9NG202200.2.p | GATA family protein | |
Pavir.9NG267700.1.p | GATA family protein | |
Pavir.9NG483000.1.p | GATA family protein | |
Pavir.J158600.1.p | GATA family protein | |
Pavir.J158600.2.p | GATA family protein | |
Pavir.J174400.1.p | GATA family protein | |
Pavir.J322700.1.p | GATA family protein | |
Pavir.J728100.1.p | GATA family protein | |
Pavir.J728200.1.p | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008