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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
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PH01000001G0820 | GATA family protein | |
PH01000036G1110 | GATA family protein | |
PH01000040G1560 | GATA family protein | |
PH01000114G0660 | GATA family protein | |
PH01000157G0800 | GATA family protein | |
PH01000162G1360 | GATA family protein | |
PH01000232G0180 | GATA family protein | |
PH01000242G0460 | GATA family protein | |
PH01000263G0760 | GATA family protein | |
PH01000284G0590 | GATA family protein | |
PH01000417G1130 | GATA family protein | |
PH01000468G1050 | GATA family protein | |
PH01000604G0620 | GATA family protein | |
PH01000750G0690 | GATA family protein | |
PH01000836G0660 | GATA family protein | |
PH01000985G0260 | GATA family protein | |
PH01001002G0190 | GATA family protein | |
PH01001129G0380 | GATA family protein | |
PH01001155G0480 | GATA family protein | |
PH01001253G0390 | GATA family protein | |
PH01001451G0450 | GATA family protein | |
PH01001557G0370 | GATA family protein | |
PH01001584G0350 | GATA family protein | |
PH01001907G0160 | GATA family protein | |
PH01002105G0190 | GATA family protein | |
PH01002473G0050 | GATA family protein | |
PH01002681G0110 | GATA family protein | |
PH01002830G0260 | GATA family protein | |
PH01003365G0100 | GATA family protein | |
PH01003433G0110 | GATA family protein | |
PH01004789G0060 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008