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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
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Ote100015360061 | GATA family protein | |
Ote100022550201 | GATA family protein | |
Ote100029390001 | GATA family protein | |
Ote100032770031 | GATA family protein | |
Ote100054180051 | GATA family protein | |
Ote100073570141 | GATA family protein | |
Ote100073930041 | GATA family protein | |
Ote100080280041 | GATA family protein | |
Ote100107450161 | GATA family protein | |
Ote100111970121 | GATA family protein | |
Ote100134910121 | GATA family protein | |
Ote100140410031 | GATA family protein | |
Ote100140410032 | GATA family protein | |
Ote100144650191 | GATA family protein | |
Ote100160850011 | GATA family protein | |
Ote100171360101 | GATA family protein | |
Ote100186560001 | GATA family protein | |
Ote100190240051 | GATA family protein | |
Ote100190950121 | GATA family protein | |
Ote100196230021 | GATA family protein | |
Ote100201070011 | GATA family protein | |
Ote100206720021 | GATA family protein | |
Ote100216830041 | GATA family protein | |
Ote100227730021 | GATA family protein | |
Ote100259820031 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008