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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
BGIOSGA000005-PA | GATA family protein | |
BGIOSGA000840-PA | GATA family protein | |
BGIOSGA001076-PA | GATA family protein | |
BGIOSGA003453-PA | GATA family protein | |
BGIOSGA006859-PA | GATA family protein | |
BGIOSGA007539-PA | GATA family protein | |
BGIOSGA008714-PA | GATA family protein | |
BGIOSGA009241-PA | GATA family protein | |
BGIOSGA009856-PA | GATA family protein | |
BGIOSGA010036-PA | GATA family protein | |
BGIOSGA011849-PA | GATA family protein | |
BGIOSGA013867-PA | GATA family protein | |
BGIOSGA013869-PA | GATA family protein | |
BGIOSGA014620-PA | GATA family protein | |
BGIOSGA016846-PA | GATA family protein | |
BGIOSGA017544-PA | GATA family protein | |
BGIOSGA018779-PA | GATA family protein | |
BGIOSGA020209-PA | GATA family protein | |
BGIOSGA020424-PA | GATA family protein | |
BGIOSGA020596-PA | GATA family protein | |
BGIOSGA023117-PA | GATA family protein | |
BGIOSGA023119-PA | GATA family protein | |
BGIOSGA024531-PA | GATA family protein | |
BGIOSGA031769-PA | GATA family protein | |
BGIOSGA033429-PA | GATA family protein | |
BGIOSGA033765-PA | GATA family protein | |
BGIOSGA033769-PA | GATA family protein | |
BGIOSGA034366-PA | GATA family protein | |
BGIOSGA034369-PA | GATA family protein | |
BGIOSGA037060-PA | GATA family protein | |
BGIOSGA037833-PA | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008