![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
AMDW01040699.1_FGP001 | GATA family protein | |
KN538702.1_FGP116 | GATA family protein | |
KN538757.1_FGP014 | GATA family protein | |
KN538788.1_FGP023 | GATA family protein | |
KN538794.1_FGP036 | GATA family protein | |
KN538854.1_FGP022 | GATA family protein | |
KN538869.1_FGP027 | GATA family protein | |
KN539195.1_FGP013 | GATA family protein | |
KN540155.1_FGP001 | GATA family protein | |
KN540203.1_FGP003 | GATA family protein | |
KN540718.1_FGP001 | GATA family protein | |
KN540807.1_FGP001 | GATA family protein | |
KN543694.1_FGP001 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008