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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
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Manes.01G087500.1.p | GATA family protein | |
Manes.01G135900.1.p | GATA family protein | |
Manes.01G224400.1.p | GATA family protein | |
Manes.02G044400.1.p | GATA family protein | |
Manes.02G094300.1.p | GATA family protein | |
Manes.02G099500.1.p | GATA family protein | |
Manes.03G033200.1.p | GATA family protein | |
Manes.03G047800.1.p | GATA family protein | |
Manes.03G059100.1.p | GATA family protein | |
Manes.03G154500.1.p | GATA family protein | |
Manes.03G154500.2.p | GATA family protein | |
Manes.03G154500.3.p | GATA family protein | |
Manes.03G154500.4.p | GATA family protein | |
Manes.03G201300.1.p | GATA family protein | |
Manes.04G084400.1.p | GATA family protein | |
Manes.04G084400.2.p | GATA family protein | |
Manes.04G132800.1.p | GATA family protein | |
Manes.05G050300.1.p | GATA family protein | |
Manes.05G189500.1.p | GATA family protein | |
Manes.05G189500.2.p | GATA family protein | |
Manes.05G189600.1.p | GATA family protein | |
Manes.07G041200.1.p | GATA family protein | |
Manes.07G041200.2.p | GATA family protein | |
Manes.07G041300.1.p | GATA family protein | |
Manes.07G041300.2.p | GATA family protein | |
Manes.07G076400.1.p | GATA family protein | |
Manes.07G099600.1.p | GATA family protein | |
Manes.08G113300.1.p | GATA family protein | |
Manes.08G149300.1.p | GATA family protein | |
Manes.09G142600.1.p | GATA family protein | |
Manes.09G142600.2.p | GATA family protein | |
Manes.09G142600.3.p | GATA family protein | |
Manes.09G174900.1.p | GATA family protein | |
Manes.10G046800.1.p | GATA family protein | |
Manes.10G097400.1.p | GATA family protein | |
Manes.10G097400.2.p | GATA family protein | |
Manes.11G034900.1.p | GATA family protein | |
Manes.11G146600.1.p | GATA family protein | |
Manes.15G007100.1.p | GATA family protein | |
Manes.15G049400.1.p | GATA family protein | |
Manes.15G103300.1.p | GATA family protein | |
Manes.16G074900.1.p | GATA family protein | |
Manes.16G080400.1.p | GATA family protein | |
Manes.16G102600.1.p | GATA family protein | |
Manes.18G056300.1.p | GATA family protein | |
Manes.18G056400.1.p | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008