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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Kalax.0003s0045.1.p | GATA family protein | |
Kalax.0003s0086.1.p | GATA family protein | |
Kalax.0003s0201.1.p | GATA family protein | |
Kalax.0009s0235.1.p | GATA family protein | |
Kalax.0010s0020.1.p | GATA family protein | |
Kalax.0010s0020.2.p | GATA family protein | |
Kalax.0010s0020.3.p | GATA family protein | |
Kalax.0010s0020.4.p | GATA family protein | |
Kalax.0010s0020.5.p | GATA family protein | |
Kalax.0010s0020.6.p | GATA family protein | |
Kalax.0011s0117.1.p | GATA family protein | |
Kalax.0015s0174.1.p | GATA family protein | |
Kalax.0016s0152.1.p | GATA family protein | |
Kalax.0016s0161.1.p | GATA family protein | |
Kalax.0016s0191.1.p | GATA family protein | |
Kalax.0021s0130.1.p | GATA family protein | |
Kalax.0024s0106.1.p | GATA family protein | |
Kalax.0024s0106.2.p | GATA family protein | |
Kalax.0033s0143.1.p | GATA family protein | |
Kalax.0033s0144.1.p | GATA family protein | |
Kalax.0033s0144.2.p | GATA family protein | |
Kalax.0033s0144.3.p | GATA family protein | |
Kalax.0033s0144.4.p | GATA family protein | |
Kalax.0036s0106.1.p | GATA family protein | |
Kalax.0039s0037.1.p | GATA family protein | |
Kalax.0040s0064.1.p | GATA family protein | |
Kalax.0046s0008.1.p | GATA family protein | |
Kalax.0046s0069.1.p | GATA family protein | |
Kalax.0046s0069.2.p | GATA family protein | |
Kalax.0051s0122.1.p | GATA family protein | |
Kalax.0053s0107.1.p | GATA family protein | |
Kalax.0053s0107.2.p | GATA family protein | |
Kalax.0060s0118.1.p | GATA family protein | |
Kalax.0067s0044.1.p | GATA family protein | |
Kalax.0074s0042.1.p | GATA family protein | |
Kalax.0077s0058.1.p | GATA family protein | |
Kalax.0077s0058.2.p | GATA family protein | |
Kalax.0077s0059.1.p | GATA family protein | |
Kalax.0077s0059.2.p | GATA family protein | |
Kalax.0077s0059.3.p | GATA family protein | |
Kalax.0077s0059.4.p | GATA family protein | |
Kalax.0095s0057.1.p | GATA family protein | |
Kalax.0098s0012.1.p | GATA family protein | |
Kalax.0102s0101.1.p | GATA family protein | |
Kalax.0112s0019.1.p | GATA family protein | |
Kalax.0114s0058.1.p | GATA family protein | |
Kalax.0114s0058.2.p | GATA family protein | |
Kalax.0131s0017.1.p | GATA family protein | |
Kalax.0131s0017.2.p | GATA family protein | |
Kalax.0159s0003.1.p | GATA family protein | |
Kalax.0168s0072.1.p | GATA family protein | |
Kalax.0168s0072.2.p | GATA family protein | |
Kalax.0168s0072.3.p | GATA family protein | |
Kalax.0179s0003.1.p | GATA family protein | |
Kalax.0188s0012.1.p | GATA family protein | |
Kalax.0218s0020.1.p | GATA family protein | |
Kalax.0232s0042.1.p | GATA family protein | |
Kalax.0237s0048.1.p | GATA family protein | |
Kalax.0242s0027.1.p | GATA family protein | |
Kalax.0242s0027.2.p | GATA family protein | |
Kalax.0276s0029.1.p | GATA family protein | |
Kalax.0290s0033.1.p | GATA family protein | |
Kalax.0290s0033.2.p | GATA family protein | |
Kalax.0290s0033.3.p | GATA family protein | |
Kalax.0324s0006.1.p | GATA family protein | |
Kalax.0324s0006.2.p | GATA family protein | |
Kalax.0334s0001.1.p | GATA family protein | |
Kalax.0337s0017.1.p | GATA family protein | |
Kalax.0365s0032.1.p | GATA family protein | |
Kalax.0391s0010.1.p | GATA family protein | |
Kalax.0412s0024.1.p | GATA family protein | |
Kalax.0424s0008.1.p | GATA family protein | |
Kalax.0424s0008.2.p | GATA family protein | |
Kalax.0446s0009.1.p | GATA family protein | |
Kalax.0461s0023.1.p | GATA family protein | |
Kalax.0461s0023.2.p | GATA family protein | |
Kalax.0510s0020.1.p | GATA family protein | |
Kalax.0550s0026.1.p | GATA family protein | |
Kalax.0595s0011.1.p | GATA family protein | |
Kalax.0621s0019.1.p | GATA family protein | |
Kalax.0639s0011.1.p | GATA family protein | |
Kalax.0641s0002.1.p | GATA family protein | |
Kalax.0641s0002.2.p | GATA family protein | |
Kalax.0681s0006.1.p | GATA family protein | |
Kalax.0713s0021.1.p | GATA family protein | |
Kalax.0720s0022.1.p | GATA family protein | |
Kalax.0781s0003.1.p | GATA family protein | |
Kalax.0810s0017.1.p | GATA family protein | |
Kalax.0890s0005.1.p | GATA family protein | |
Kalax.0919s0009.1.p | GATA family protein | |
Kalax.1002s0002.1.p | GATA family protein | |
Kalax.1012s0012.1.p | GATA family protein | |
Kalax.1012s0012.2.p | GATA family protein | |
Kalax.1068s0011.1.p | GATA family protein | |
Kalax.1071s0005.1.p | GATA family protein | |
Kalax.1215s0006.1.p | GATA family protein | |
Kalax.1215s0006.2.p | GATA family protein | |
Kalax.1256s0001.1.p | GATA family protein | |
Kalax.1459s0001.1.p | GATA family protein | |
Kalax.1493s0002.1.p | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008