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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Kaladp0001s0264.1.p | GATA family protein | |
Kaladp0015s0060.1.p | GATA family protein | |
Kaladp0018s0222.1.p | GATA family protein | |
Kaladp0018s0222.2.p | GATA family protein | |
Kaladp0018s0268.1.p | GATA family protein | |
Kaladp0024s0676.1.p | GATA family protein | |
Kaladp0024s0676.2.p | GATA family protein | |
Kaladp0024s0676.3.p | GATA family protein | |
Kaladp0024s0676.4.p | GATA family protein | |
Kaladp0024s0676.5.p | GATA family protein | |
Kaladp0024s0676.6.p | GATA family protein | |
Kaladp0024s0935.1.p | GATA family protein | |
Kaladp0032s0353.1.p | GATA family protein | |
Kaladp0039s0181.1.p | GATA family protein | |
Kaladp0039s0307.1.p | GATA family protein | |
Kaladp0040s0018.1.p | GATA family protein | |
Kaladp0045s0122.1.p | GATA family protein | |
Kaladp0045s0123.1.p | GATA family protein | |
Kaladp0045s0271.1.p | GATA family protein | |
Kaladp0047s0014.1.p | GATA family protein | |
Kaladp0047s0094.1.p | GATA family protein | |
Kaladp0048s0596.1.p | GATA family protein | |
Kaladp0053s0311.1.p | GATA family protein | |
Kaladp0053s0311.2.p | GATA family protein | |
Kaladp0058s0105.1.p | GATA family protein | |
Kaladp0059s0358.1.p | GATA family protein | |
Kaladp0060s0039.1.p | GATA family protein | |
Kaladp0060s0073.1.p | GATA family protein | |
Kaladp0060s0284.1.p | GATA family protein | |
Kaladp0060s0284.2.p | GATA family protein | |
Kaladp0060s0284.3.p | GATA family protein | |
Kaladp0061s0057.1.p | GATA family protein | |
Kaladp0061s0057.2.p | GATA family protein | |
Kaladp0065s0023.1.p | GATA family protein | |
Kaladp0065s0023.2.p | GATA family protein | |
Kaladp0066s0025.1.p | GATA family protein | |
Kaladp0066s0025.2.p | GATA family protein | |
Kaladp0066s0025.3.p | GATA family protein | |
Kaladp0081s0148.1.p | GATA family protein | |
Kaladp0081s0148.2.p | GATA family protein | |
Kaladp0088s0022.1.p | GATA family protein | |
Kaladp0088s0022.2.p | GATA family protein | |
Kaladp0088s0022.3.p | GATA family protein | |
Kaladp0095s0409.1.p | GATA family protein | |
Kaladp0095s0409.2.p | GATA family protein | |
Kaladp0096s0012.1.p | GATA family protein | |
Kaladp0096s0012.2.p | GATA family protein | |
Kaladp0099s0106.1.p | GATA family protein | |
Kaladp0099s0106.2.p | GATA family protein | |
Kaladp0101s0020.1.p | GATA family protein | |
Kaladp0101s0020.2.p | GATA family protein | |
Kaladp0102s0140.1.p | GATA family protein | |
Kaladp0500s0002.1.p | GATA family protein | |
Kaladp0500s0002.2.p | GATA family protein | |
Kaladp0515s0238.1.p | GATA family protein | |
Kaladp0808s0031.1.p | GATA family protein | |
Kaladp0808s0031.2.p | GATA family protein | |
Kaladp0808s0059.1.p | GATA family protein | |
Kaladp1129s0041.1.p | GATA family protein | |
Kaladp1129s0041.2.p | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008