PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
---|---|---|
Glycine max (92) | Glyma.01G073100.1.p | GATA family protein |
Glyma.01G169400.1.p | GATA family protein | |
Glyma.01G169400.2.p | GATA family protein | |
Glyma.01G205100.1.p | GATA family protein | |
Glyma.02G051100.1.p | GATA family protein | |
Glyma.02G056600.1.p | GATA family protein | |
Glyma.02G071500.1.p | GATA family protein | |
Glyma.02G071500.2.p | GATA family protein | |
Glyma.02G071500.3.p | GATA family protein | |
Glyma.02G073900.1.p | GATA family protein | |
Glyma.02G073900.2.p | GATA family protein | |
Glyma.02G073900.3.p | GATA family protein | |
Glyma.02G073900.4.p | GATA family protein | |
Glyma.02G215600.1.p | GATA family protein | |
Glyma.03G118100.1.p | GATA family protein | |
Glyma.03G232900.1.p | GATA family protein | |
Glyma.04G008900.1.p | GATA family protein | |
Glyma.04G008900.2.p | GATA family protein | |
Glyma.04G051300.1.p | GATA family protein | |
Glyma.04G084900.1.p | GATA family protein | |
Glyma.04G096200.1.p | GATA family protein | |
Glyma.04G096300.1.p | GATA family protein | |
Glyma.05G064800.1.p | GATA family protein | |
Glyma.05G170000.1.p | GATA family protein | |
Glyma.05G170100.1.p | GATA family protein | |
Glyma.06G008800.1.p | GATA family protein | |
Glyma.06G086400.1.p | GATA family protein | |
Glyma.06G097900.1.p | GATA family protein | |
Glyma.06G098000.1.p | GATA family protein | |
Glyma.07G016800.1.p | GATA family protein | |
Glyma.07G108900.1.p | GATA family protein | |
Glyma.07G182700.1.p | GATA family protein | |
Glyma.07G243000.1.p | GATA family protein | |
Glyma.07G243000.2.p | GATA family protein | |
Glyma.08G067200.1.p | GATA family protein | |
Glyma.08G142500.1.p | GATA family protein | |
Glyma.08G184500.1.p | GATA family protein | |
Glyma.08G202100.1.p | GATA family protein | |
Glyma.08G221800.1.p | GATA family protein | |
Glyma.08G221800.10.p | GATA family protein | |
Glyma.08G221800.2.p | GATA family protein | |
Glyma.08G221800.3.p | GATA family protein | |
Glyma.08G221800.4.p | GATA family protein | |
Glyma.08G221800.5.p | GATA family protein | |
Glyma.08G221800.6.p | GATA family protein | |
Glyma.08G221800.7.p | GATA family protein | |
Glyma.08G221800.8.p | GATA family protein | |
Glyma.08G221800.9.p | GATA family protein | |
Glyma.08G344500.1.p | GATA family protein | |
Glyma.09G062800.1.p | GATA family protein | |
Glyma.09G076800.1.p | GATA family protein | |
Glyma.10G126900.1.p | GATA family protein | |
Glyma.10G126900.2.p | GATA family protein | |
Glyma.10G126900.3.p | GATA family protein | |
Glyma.10G210500.1.p | GATA family protein | |
Glyma.10G210500.2.p | GATA family protein | |
Glyma.10G210500.3.p | GATA family protein | |
Glyma.11G037900.1.p | GATA family protein | |
Glyma.11G068700.1.p | GATA family protein | |
Glyma.11G111700.1.p | GATA family protein | |
Glyma.11G145400.1.p | GATA family protein | |
Glyma.11G145400.2.p | GATA family protein | |
Glyma.11G145400.3.p | GATA family protein | |
Glyma.11G156200.1.p | GATA family protein | |
Glyma.12G037700.1.p | GATA family protein | |
Glyma.12G037700.2.p | GATA family protein | |
Glyma.12G076500.1.p | GATA family protein | |
Glyma.12G174200.1.p | GATA family protein | |
Glyma.12G174200.2.p | GATA family protein | |
Glyma.13G103900.1.p | GATA family protein | |
Glyma.13G325100.1.p | GATA family protein | |
Glyma.14G094800.1.p | GATA family protein | |
Glyma.14G094800.2.p | GATA family protein | |
Glyma.14G145700.1.p | GATA family protein | |
Glyma.14G182800.1.p | GATA family protein | |
Glyma.15G045700.1.p | GATA family protein | |
Glyma.15G169300.1.p | GATA family protein | |
Glyma.16G042300.1.p | GATA family protein | |
Glyma.16G139400.1.p | GATA family protein | |
Glyma.16G152700.1.p | GATA family protein | |
Glyma.16G155300.1.p | GATA family protein | |
Glyma.16G155300.2.p | GATA family protein | |
Glyma.16G155300.3.p | GATA family protein | |
Glyma.17G030900.1.p | GATA family protein | |
Glyma.17G055200.1.p | GATA family protein | |
Glyma.17G055200.2.p | GATA family protein | |
Glyma.17G146600.1.p | GATA family protein | |
Glyma.17G192800.1.p | GATA family protein | |
Glyma.17G228700.1.p | GATA family protein | |
Glyma.19G110200.1.p | GATA family protein | |
Glyma.19G229900.1.p | GATA family protein | |
Glyma.20G180100.1.p | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008