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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
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Thhalv10000871m | GATA family protein | |
Thhalv10001591m | GATA family protein | |
Thhalv10002609m | GATA family protein | |
Thhalv10002799m | GATA family protein | |
Thhalv10004553m | GATA family protein | |
Thhalv10004566m | GATA family protein | |
Thhalv10005103m | GATA family protein | |
Thhalv10005181m | GATA family protein | |
Thhalv10006202m | GATA family protein | |
Thhalv10008338m | GATA family protein | |
Thhalv10008340m | GATA family protein | |
Thhalv10008343m | GATA family protein | |
Thhalv10010544m | GATA family protein | |
Thhalv10010566m | GATA family protein | |
Thhalv10010986m | GATA family protein | |
Thhalv10011695m | GATA family protein | |
Thhalv10013793m | GATA family protein | |
Thhalv10017012m | GATA family protein | |
Thhalv10020970m | GATA family protein | |
Thhalv10021612m | GATA family protein | |
Thhalv10021708m | GATA family protein | |
Thhalv10021738m | GATA family protein | |
Thhalv10022088m | GATA family protein | |
Thhalv10022854m | GATA family protein | |
Thhalv10024940m | GATA family protein | |
Thhalv10025461m | GATA family protein | |
Thhalv10025666m | GATA family protein | |
Thhalv10025757m | GATA family protein | |
Thhalv10025793m | GATA family protein | |
Thhalv10025795m | GATA family protein | |
Thhalv10025977m | GATA family protein | |
Thhalv10026110m | GATA family protein | |
Thhalv10026300m | GATA family protein | |
Thhalv10027520m | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008