PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Species | TF ID | Description |
---|---|---|
Eucgr.A00193.1.p | GATA family protein | |
Eucgr.A02086.1.p | GATA family protein | |
Eucgr.B02079.1.p | GATA family protein | |
Eucgr.C00556.1.p | GATA family protein | |
Eucgr.C00602.1.p | GATA family protein | |
Eucgr.C00899.1.p | GATA family protein | |
Eucgr.C03048.1.p | GATA family protein | |
Eucgr.C03895.1.p | GATA family protein | |
Eucgr.D02129.1.p | GATA family protein | |
Eucgr.D02129.2.p | GATA family protein | |
Eucgr.E00364.1.p | GATA family protein | |
Eucgr.E00364.2.p | GATA family protein | |
Eucgr.E00364.3.p | GATA family protein | |
Eucgr.F00433.1.p | GATA family protein | |
Eucgr.F02157.1.p | GATA family protein | |
Eucgr.F02157.2.p | GATA family protein | |
Eucgr.G01722.1.p | GATA family protein | |
Eucgr.G02840.1.p | GATA family protein | |
Eucgr.H00105.1.p | GATA family protein | |
Eucgr.H01071.1.p | GATA family protein | |
Eucgr.H04023.1.p | GATA family protein | |
Eucgr.I02372.1.p | GATA family protein | |
Eucgr.J00922.1.p | GATA family protein | |
Eucgr.J01083.1.p | GATA family protein | |
Eucgr.J01083.2.p | GATA family protein | |
Eucgr.J01083.3.p | GATA family protein | |
Eucgr.J02392.1.p | GATA family protein | |
Eucgr.J02947.1.p | GATA family protein | |
Eucgr.J03166.1.p | GATA family protein | |
Eucgr.J03166.2.p | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008