![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Ciclev10001532m | GATA family protein | |
Ciclev10001533m | GATA family protein | |
Ciclev10001537m | GATA family protein | |
Ciclev10002006m | GATA family protein | |
Ciclev10002056m | GATA family protein | |
Ciclev10002060m | GATA family protein | |
Ciclev10002131m | GATA family protein | |
Ciclev10002330m | GATA family protein | |
Ciclev10003698m | GATA family protein | |
Ciclev10003699m | GATA family protein | |
Ciclev10003771m | GATA family protein | |
Ciclev10005658m | GATA family protein | |
Ciclev10006161m | GATA family protein | |
Ciclev10008690m | GATA family protein | |
Ciclev10008943m | GATA family protein | |
Ciclev10008956m | GATA family protein | |
Ciclev10008968m | GATA family protein | |
Ciclev10008982m | GATA family protein | |
Ciclev10009004m | GATA family protein | |
Ciclev10017490m | GATA family protein | |
Ciclev10019607m | GATA family protein | |
Ciclev10019614m | GATA family protein | |
Ciclev10021190m | GATA family protein | |
Ciclev10021733m | GATA family protein | |
Ciclev10022856m | GATA family protein | |
Ciclev10022923m | GATA family protein | |
Ciclev10025844m | GATA family protein | |
Ciclev10026006m | GATA family protein | |
Ciclev10026328m | GATA family protein | |
Ciclev10027138m | GATA family protein | |
Ciclev10027306m | GATA family protein | |
Ciclev10028671m | GATA family protein | |
Ciclev10028736m | GATA family protein | |
Ciclev10028860m | GATA family protein | |
Ciclev10028987m | GATA family protein | |
Ciclev10029015m | GATA family protein | |
Ciclev10029075m | GATA family protein | |
Ciclev10032015m | GATA family protein | |
Ciclev10032016m | GATA family protein | |
Ciclev10032018m | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008