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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Camelina sativa (94) | Csa00382s290.1 | GATA family protein |
Csa01g007780.1 | GATA family protein | |
Csa01g019550.1 | GATA family protein | |
Csa01g023820.1 | GATA family protein | |
Csa01g024190.1 | GATA family protein | |
Csa01g030000.1 | GATA family protein | |
Csa01g041510.1 | GATA family protein | |
Csa02g035390.1 | GATA family protein | |
Csa02g061170.1 | GATA family protein | |
Csa02g076460.1 | GATA family protein | |
Csa03g011450.1 | GATA family protein | |
Csa03g058510.1 | GATA family protein | |
Csa04g026020.1 | GATA family protein | |
Csa04g036610.1 | GATA family protein | |
Csa04g036840.1 | GATA family protein | |
Csa04g040960.1 | GATA family protein | |
Csa04g062950.1 | GATA family protein | |
Csa05g004220.1 | GATA family protein | |
Csa05g038340.1 | GATA family protein | |
Csa05g038350.1 | GATA family protein | |
Csa05g038360.1 | GATA family protein | |
Csa05g092350.1 | GATA family protein | |
Csa06g018920.1 | GATA family protein | |
Csa06g024980.1 | GATA family protein | |
Csa06g025220.1 | GATA family protein | |
Csa06g029270.1 | GATA family protein | |
Csa06g051440.1 | GATA family protein | |
Csa07g004390.1 | GATA family protein | |
Csa07g016240.1 | GATA family protein | |
Csa07g016250.1 | GATA family protein | |
Csa07g016260.1 | GATA family protein | |
Csa08g023490.1 | GATA family protein | |
Csa09g002490.1 | GATA family protein | |
Csa09g058050.1 | GATA family protein | |
Csa09g064590.1 | GATA family protein | |
Csa10g004630.1 | GATA family protein | |
Csa10g004910.1 | GATA family protein | |
Csa10g007450.1 | GATA family protein | |
Csa10g009420.1 | GATA family protein | |
Csa10g016760.1 | GATA family protein | |
Csa10g018550.1 | GATA family protein | |
Csa10g027810.1 | GATA family protein | |
Csa10g029720.1 | GATA family protein | |
Csa11g005140.1 | GATA family protein | |
Csa11g005440.1 | GATA family protein | |
Csa11g007240.1 | GATA family protein | |
Csa11g010290.1 | GATA family protein | |
Csa11g018240.1 | GATA family protein | |
Csa11g020260.1 | GATA family protein | |
Csa11g031090.1 | GATA family protein | |
Csa11g033970.1 | GATA family protein | |
Csa11g064680.1 | GATA family protein | |
Csa11g078560.1 | GATA family protein | |
Csa11g090330.1 | GATA family protein | |
Csa11g104640.1 | GATA family protein | |
Csa12g004840.1 | GATA family protein | |
Csa12g005160.1 | GATA family protein | |
Csa12g008900.1 | GATA family protein | |
Csa12g012980.1 | GATA family protein | |
Csa12g025910.1 | GATA family protein | |
Csa12g029880.1 | GATA family protein | |
Csa12g047050.1 | GATA family protein | |
Csa12g053280.1 | GATA family protein | |
Csa12g053280.2 | GATA family protein | |
Csa13g033740.1 | GATA family protein | |
Csa13g034860.1 | GATA family protein | |
Csa14g009450.1 | GATA family protein | |
Csa14g059850.1 | GATA family protein | |
Csa14g059850.2 | GATA family protein | |
Csa15g008400.1 | GATA family protein | |
Csa15g021790.1 | GATA family protein | |
Csa15g031100.1 | GATA family protein | |
Csa15g048570.1 | GATA family protein | |
Csa15g077910.1 | GATA family protein | |
Csa16g004350.1 | GATA family protein | |
Csa16g016830.1 | GATA family protein | |
Csa16g016840.1 | GATA family protein | |
Csa16g016850.1 | GATA family protein | |
Csa17g011440.1 | GATA family protein | |
Csa17g090500.1 | GATA family protein | |
Csa18g002730.1 | GATA family protein | |
Csa18g018650.1 | GATA family protein | |
Csa18g020080.1 | GATA family protein | |
Csa18g029770.1 | GATA family protein | |
Csa18g042220.1 | GATA family protein | |
Csa19g010440.1 | GATA family protein | |
Csa19g023770.1 | GATA family protein | |
Csa19g028720.1 | GATA family protein | |
Csa19g029120.1 | GATA family protein | |
Csa19g035950.1 | GATA family protein | |
Csa19g057970.1 | GATA family protein | |
Csa20g049180.1 | GATA family protein | |
Csa20g054160.1 | GATA family protein | |
Csa20g081520.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008