![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
---|---|---|
Brassica rapa (79) | XP_009101446.1 | GATA family protein |
XP_009101447.1 | GATA family protein | |
XP_009102248.1 | GATA family protein | |
XP_009103517.1 | GATA family protein | |
XP_009103676.1 | GATA family protein | |
XP_009103677.1 | GATA family protein | |
XP_009103933.1 | GATA family protein | |
XP_009104270.1 | GATA family protein | |
XP_009107175.1 | GATA family protein | |
XP_009107176.1 | GATA family protein | |
XP_009108336.1 | GATA family protein | |
XP_009108711.1 | GATA family protein | |
XP_009108712.1 | GATA family protein | |
XP_009109327.1 | GATA family protein | |
XP_009109780.1 | GATA family protein | |
XP_009110008.1 | GATA family protein | |
XP_009110050.1 | GATA family protein | |
XP_009110121.1 | GATA family protein | |
XP_009110185.1 | GATA family protein | |
XP_009110210.1 | GATA family protein | |
XP_009110229.1 | GATA family protein | |
XP_009110913.1 | GATA family protein | |
XP_009111680.1 | GATA family protein | |
XP_009112294.1 | GATA family protein | |
XP_009112295.1 | GATA family protein | |
XP_009112296.1 | GATA family protein | |
XP_009112297.1 | GATA family protein | |
XP_009112489.1 | GATA family protein | |
XP_009114215.1 | GATA family protein | |
XP_009114291.1 | GATA family protein | |
XP_009114292.1 | GATA family protein | |
XP_009114293.1 | GATA family protein | |
XP_009114295.1 | GATA family protein | |
XP_009115764.1 | GATA family protein | |
XP_009116158.1 | GATA family protein | |
XP_009116733.1 | GATA family protein | |
XP_009118398.1 | GATA family protein | |
XP_009120195.1 | GATA family protein | |
XP_009124673.1 | GATA family protein | |
XP_009125288.1 | GATA family protein | |
XP_009126922.1 | GATA family protein | |
XP_009128943.1 | GATA family protein | |
XP_009129774.1 | GATA family protein | |
XP_009130771.1 | GATA family protein | |
XP_009130778.1 | GATA family protein | |
XP_009132168.1 | GATA family protein | |
XP_009135503.1 | GATA family protein | |
XP_009135706.1 | GATA family protein | |
XP_009135707.1 | GATA family protein | |
XP_009135870.1 | GATA family protein | |
XP_009136565.1 | GATA family protein | |
XP_009136583.1 | GATA family protein | |
XP_009136743.1 | GATA family protein | |
XP_009137582.1 | GATA family protein | |
XP_009138082.1 | GATA family protein | |
XP_009138148.1 | GATA family protein | |
XP_009138318.1 | GATA family protein | |
XP_009138319.1 | GATA family protein | |
XP_009138320.1 | GATA family protein | |
XP_009138942.1 | GATA family protein | |
XP_009140894.1 | GATA family protein | |
XP_009140895.1 | GATA family protein | |
XP_009140896.1 | GATA family protein | |
XP_009142013.1 | GATA family protein | |
XP_009142314.1 | GATA family protein | |
XP_009143097.1 | GATA family protein | |
XP_009143303.1 | GATA family protein | |
XP_009145512.1 | GATA family protein | |
XP_009145513.1 | GATA family protein | |
XP_009145707.1 | GATA family protein | |
XP_009145767.1 | GATA family protein | |
XP_009146054.1 | GATA family protein | |
XP_009146462.1 | GATA family protein | |
XP_009148049.1 | GATA family protein | |
XP_009148050.1 | GATA family protein | |
XP_009149294.1 | GATA family protein | |
XP_009149301.1 | GATA family protein | |
XP_009151105.1 | GATA family protein | |
XP_009151727.1 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008