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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
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Bradi1g03020.1.p | GATA family protein | |
Bradi1g09550.1.p | GATA family protein | |
Bradi1g09550.2.p | GATA family protein | |
Bradi1g12330.5.p | GATA family protein | |
Bradi1g33980.1.p | GATA family protein | |
Bradi1g33980.2.p | GATA family protein | |
Bradi1g37480.1.p | GATA family protein | |
Bradi1g75420.1.p | GATA family protein | |
Bradi1g78540.1.p | GATA family protein | |
Bradi2g12590.1.p | GATA family protein | |
Bradi2g14890.1.p | GATA family protein | |
Bradi2g19480.1.p | GATA family protein | |
Bradi2g19480.2.p | GATA family protein | |
Bradi2g32792.1.p | GATA family protein | |
Bradi2g35057.1.p | GATA family protein | |
Bradi2g45750.1.p | GATA family protein | |
Bradi2g49620.1.p | GATA family protein | |
Bradi2g62660.1.p | GATA family protein | |
Bradi3g03800.1.p | GATA family protein | |
Bradi3g03810.2.p | GATA family protein | |
Bradi3g08240.3.p | GATA family protein | |
Bradi3g28003.1.p | GATA family protein | |
Bradi3g33200.1.p | GATA family protein | |
Bradi3g50160.2.p | GATA family protein | |
Bradi3g54720.1.p | GATA family protein | |
Bradi4g01140.1.p | GATA family protein | |
Bradi4g01140.2.p | GATA family protein | |
Bradi4g15720.1.p | GATA family protein | |
Bradi4g23550.1.p | GATA family protein | |
Bradi4g41570.1.p | GATA family protein | |
Bradi5g17057.1.p | GATA family protein | |
Bradi5g17370.1.p | GATA family protein | |
Bradi5g17370.3.p | GATA family protein | |
Bradi5g23656.1.p | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008