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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Species | TF ID | Description |
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323669 | GATA family protein | |
329901 | GATA family protein | |
356279 | GATA family protein | |
470852 | GATA family protein | |
477989 | GATA family protein | |
479155 | GATA family protein | |
479637 | GATA family protein | |
479930 | GATA family protein | |
485891 | GATA family protein | |
486528 | GATA family protein | |
490976 | GATA family protein | |
491007 | GATA family protein | |
491187 | GATA family protein | |
491407 | GATA family protein | |
492197 | GATA family protein | |
492399 | GATA family protein | |
493120 | GATA family protein | |
495776 | GATA family protein | |
496973 | GATA family protein | |
863107 | GATA family protein | |
865791 | GATA family protein | |
866473 | GATA family protein | |
873583 | GATA family protein | |
875174 | GATA family protein | |
892135 | GATA family protein | |
901675 | GATA family protein | |
903940 | GATA family protein | |
917909 | GATA family protein |
GATA factors were first identified as proteins that interact with conserved WGATAR (W = T or A; R = G or A) motifs involved in erythroid-specific gene expressionin vertebrates.
GATA factors are characterised by the presence of conserved, type-IV zinc-finger motifs Animal factors typically contain two C-x2-Cx17-C-x2-C zinc-finger domains. The majority of known fungal GATA factors contain a single C-x2-C-x17-C-x2-C finger with greatest similarity to the carboxyl (C) terminal finger of animal GATA factors.Several examples of fungal GATA factors containing a variant C-x2-C-x18-C-x2-C DNA-binding domain are also known.
Examples of both C-x2-C-x17-Cx2-C (Type IVa) and C-x2-C-x18-C-x2-C (Type IVb) GATA factors are found within fungi; animals onlycontain the former configuration, and plants only the latter. Plant GATA factors typically contain a single zinc finger. The Arabidopsis type-IV zinc-finger proteins may represent the previously defined family of nuclear GATA-binding proteins implicated in light-responsive transcription.
Teakle GR, Manfield IW, Graham JF, Gilmartin PM.
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics.
Plant Mol Biol. 2002 Sep;50(1):43-57.
PMID: 12139008