PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH12452.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family GATA
Protein Properties Length: 351aa    MW: 36639.6 Da    PI: 7.3884
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH12452.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA47.13.3e-15197231135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cg++++p+WRr   ++  LCnaCG+y+ ++++
  PNH12452.1 197 CAHCGAKESPQWRRPLAKKVVLCNACGIYFSRHHS 231
                 **************99****************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MQAPAPPPRP AVAGSMTEVY GASRPTRQAI AASLLETVRQ ALDGSAEDGG SRLGAPQGRQ  60
RQGAAQYYAV SPASTAEVAG STSGEQPQGQ SRQKEEQGNG LRSDGASGIS APASQQGAST  120
LTELLHGTEA QHPNHHQLRQ QASSSHDSLL ADTGEASGLD AEDDQEEECL QGLVDDDGFT  180
PRRRHSSPRV GIPGGPCAHC GAKESPQWRR PLAKKVVLCN ACGIYFSRHH SLPRRKKVPG  240
NSSRSAKPAS HASGKQSILC DEKLESDELA AQAPAAAVAT VQQAQTLLLP QLPPVHTTSS  300
HQQGFATTMA HVYAGMANQP SNGRASLSLP LNVALSMPLN SIVQTFIGAL S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36240.16e-07GATA family protein