PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH12452.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | GATA | ||||||||
Protein Properties | Length: 351aa MW: 36639.6 Da PI: 7.3884 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 47.1 | 3.3e-15 | 197 | 231 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg++++p+WRr ++ LCnaCG+y+ ++++ PNH12452.1 197 CAHCGAKESPQWRRPLAKKVVLCNACGIYFSRHHS 231 **************99****************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 351 aa Download sequence |
MQAPAPPPRP AVAGSMTEVY GASRPTRQAI AASLLETVRQ ALDGSAEDGG SRLGAPQGRQ 60 RQGAAQYYAV SPASTAEVAG STSGEQPQGQ SRQKEEQGNG LRSDGASGIS APASQQGAST 120 LTELLHGTEA QHPNHHQLRQ QASSSHDSLL ADTGEASGLD AEDDQEEECL QGLVDDDGFT 180 PRRRHSSPRV GIPGGPCAHC GAKESPQWRR PLAKKVVLCN ACGIYFSRHH SLPRRKKVPG 240 NSSRSAKPAS HASGKQSILC DEKLESDELA AQAPAAAVAT VQQAQTLLLP QLPPVHTTSS 300 HQQGFATTMA HVYAGMANQP SNGRASLSLP LNVALSMPLN SIVQTFIGAL S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36240.1 | 6e-07 | GATA family protein |