PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH12158.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | SBP | ||||||||
Protein Properties | Length: 186aa MW: 20504.8 Da PI: 9.3858 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 117.3 | 8.1e-37 | 69 | 145 | 1 | 77 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +CqvegC +dls+ k y++r++vCe h k+ v++v+g+ rfCqqC+rfhel+efD +krsCr rL++hn+rrrk+ PNH12158.1 69 VCQVEGCGHDLSNEKGYYQRYRVCEPHLKMLVIAVEGKDCRFCQQCGRFHELTEFDGNKRSCRARLQQHNARRRKRD 145 6*************************************************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MAGFAEAFGV ESSAWSPSNY SWEPSSLTPE RRTSGPASSD RDQSLGPLPG SWHCQGPPKS 60 TRLSKGPLVC QVEGCGHDLS NEKGYYQRYR VCEPHLKMLV IAVEGKDCRF CQQCGRFHEL 120 TEFDGNKRSC RARLQQHNAR RRKRDPLDTS RKDAGAARKA KAAAHPRSDS SNDAVRSGGM 180 AHSADK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42200.1 | 3e-28 | SBP family protein |