PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH11951.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

GATA

Protein Properties

Length: 693aa MW: 74773.2 Da PI: 7.0728

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH11951.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	41.9	1.4e-13	210	243	1	34
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 CsnCg t+TplWRr++ n t+CnaCG+y + +g PNH11951.1 210 CSNCGITHTPLWRRDKATNLTVCNACGIYKQTHG 243 *****************************99886 PP

Sequence ? help Back to Top
Protein Sequence Length: 693 aa Download sequence
MANIGQRKRT YDEPLDLVQA KKQGIRLSLQ PLLQPLECIT QPASYDEPCE AELQQLHMQL 60 LYQLQQQHLQ HNQQHQQQLQ LRQRSELPPI PSATMPGVVV HRRLLPATAA RGSASSSPEP 120 HPYYPHKLPT ALGLLADASS SHSYSDIQAA ADSSTTASQP SSRSFQSSLA ANSSRAQQLP 180 SPHRDNTIPL PRPLPSVRRP PRTHRGPLLC SNCGITHTPL WRRDKATNLT VCNACGIYKQ 240 THGCARPVKY ISRSPMQRTA AVTPTGATGP PPPLSPAAAQ GGRGYVPYVA LPQAARLPTG 300 APAGSLLASL RWGSAETLEI SQVGQLLRAL RAADGGLLAH QRDDGCCCGA RRPMLAASSD 360 GGVVVTGSWG NDAGEEAYVD DACGGEGATL HAQGGDGRPG NQHLGGGRRM RGDGQYAAAE 420 RCPEPGAAGC GWQAASSVRS EQSLHQPEAK RMYQADEQRQ EAGLAAHGLE VPRQLEQEEG 480 DATQTRQQAA CWPVACDTGR LHAMAGGLQV LQAGSARGAC ALVLGPSKRN AWLPSGDPAA 540 PERPWHRLQD DEYDEADEVA MMLDYALEQQ RQQLAQYRSS GDADGGPVDQ PQVSLQSYRQ 600 LDPAAQDDDA PSLMQQVMQR LQHQQQQQQQ QDSSIDDGHH RRTYDTVGSE GFAPYPGQCA 660 QRPLERQQQQ QGLQGLVWRQ AMGVGDYQAG CGR

Sequence ? help Back to Top

Protein Sequence Length: 693 aa Download sequence

MANIGQRKRT YDEPLDLVQA KKQGIRLSLQ PLLQPLECIT QPASYDEPCE AELQQLHMQL  60
LYQLQQQHLQ HNQQHQQQLQ LRQRSELPPI PSATMPGVVV HRRLLPATAA RGSASSSPEP  120
HPYYPHKLPT ALGLLADASS SHSYSDIQAA ADSSTTASQP SSRSFQSSLA ANSSRAQQLP  180
SPHRDNTIPL PRPLPSVRRP PRTHRGPLLC SNCGITHTPL WRRDKATNLT VCNACGIYKQ  240
THGCARPVKY ISRSPMQRTA AVTPTGATGP PPPLSPAAAQ GGRGYVPYVA LPQAARLPTG  300
APAGSLLASL RWGSAETLEI SQVGQLLRAL RAADGGLLAH QRDDGCCCGA RRPMLAASSD  360
GGVVVTGSWG NDAGEEAYVD DACGGEGATL HAQGGDGRPG NQHLGGGRRM RGDGQYAAAE  420
RCPEPGAAGC GWQAASSVRS EQSLHQPEAK RMYQADEQRQ EAGLAAHGLE VPRQLEQEEG  480
DATQTRQQAA CWPVACDTGR LHAMAGGLQV LQAGSARGAC ALVLGPSKRN AWLPSGDPAA  540
PERPWHRLQD DEYDEADEVA MMLDYALEQQ RQQLAQYRSS GDADGGPVDQ PQVSLQSYRQ  600
LDPAAQDDDA PSLMQQVMQR LQHQQQQQQQ QDSSIDDGHH RRTYDTVGSE GFAPYPGQCA  660
QRPLERQQQQ QGLQGLVWRQ AMGVGDYQAG CGR