PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH11654.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

Nin-like

Protein Properties

Length: 443aa MW: 44861.2 Da PI: 6.3298

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH11654.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	54.5	2.2e-17	343	386	9	52
RWP-RK 9 dlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++ F lp+ dAA+ Lg++ + LKr CR +G++RWP+Rk++s+ PNH11654.1 343 AIRATFGLPLSDAARMLGMSGSELKRHCRAHGVERWPQRKLTSV 386 6899*************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MEEAIASLAT QAPCLARHTW LDGGPCLTSH PTFRQEEPQQ HYYQANTGCT ALWGPQAASA 60 LSGCAYRSEW PHVAPPPGGH AWAASTTSIE QWGRIPASAQ DAPPWQWDPT MGANVQPTAI 120 PLLPSPAAQQ YTQPPPFAAA CSSHQYSSCS MVGEPTTGSD NGCGTVATLE SFELDMECLV 180 AEIERAPWPA YPAAGCSAGL TAAASGFNPS AGLVAAAACG PILPYSTALA AAAAAGIVGS 240 AHYTAAGTRS APTTLSAAAA ALPIPRRPPS AFMQPDFASC PAFVSASVAS HGMGRSENGM 300 WQPAAGAGTL NDVRYDTVSD SDVCARGGSG LLGAAASGAL YNAIRATFGL PLSDAARMLG 360 MSGSELKRHC RAHGVERWPQ RKLTSVGRGG KFSPVPGAAG VTAVYPSDAV PAPPCGSPQG 420 PQQQGAVASV QVPSSGGSAP TGL

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MEEAIASLAT QAPCLARHTW LDGGPCLTSH PTFRQEEPQQ HYYQANTGCT ALWGPQAASA  60
LSGCAYRSEW PHVAPPPGGH AWAASTTSIE QWGRIPASAQ DAPPWQWDPT MGANVQPTAI  120
PLLPSPAAQQ YTQPPPFAAA CSSHQYSSCS MVGEPTTGSD NGCGTVATLE SFELDMECLV  180
AEIERAPWPA YPAAGCSAGL TAAASGFNPS AGLVAAAACG PILPYSTALA AAAAAGIVGS  240
AHYTAAGTRS APTTLSAAAA ALPIPRRPPS AFMQPDFASC PAFVSASVAS HGMGRSENGM  300
WQPAAGAGTL NDVRYDTVSD SDVCARGGSG LLGAAASGAL YNAIRATFGL PLSDAARMLG  360
MSGSELKRHC RAHGVERWPQ RKLTSVGRGG KFSPVPGAAG VTAVYPSDAV PAPPCGSPQG  420
PQQQGAVASV QVPSSGGSAP TGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	3e-08	Nin-like family protein