PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH11111.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family MYB_related
Protein Properties Length: 271aa    MW: 29686.5 Da    PI: 8.6215
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH11111.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.34.2e-14120164347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ +  ++G+g+W++Iar +   Rt+ q+ s+ qky
       PNH11111.1 120 PWTEEEHRLFLLGLSKFGKGDWRSIARNFVVSRTPTQVASHAQKY 164
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MAAGFSLCWD YVQPSGMATF WRLEENKVFE VALAKHYLDE DRYERIASYL PNKSLGDVQK  60
RFRELEDDLR RIDEGCSEGA SEQSSAEPSP TRSDENMSQQ PSKKAKTDVP ANGDRRKGVP  120
WTEEEHRLFL LGLSKFGKGD WRSIARNFVV SRTPTQVASH AQKYFIRLNS LNKKDKRRAS  180
IHDITSPTLP AHAPNANPTT GSPPAAPASP PQPAAPPCSG PAPVHSSLPT QAQQAAAMGV  240
FTSLALGMGM SMQQNMTPTL AMPTAPFMVS C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.15e-44MYB family protein