PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH10935.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | SBP | ||||||||
Protein Properties | Length: 61aa MW: 6877.88 Da PI: 5.7813 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 45.7 | 1.8e-14 | 18 | 60 | 3 | 45 |
SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TT CS SBP 3 qvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqq 45 +vegC d+s k y+rr+ vCe+h +a + lv+g+ qrfCqq PNH10935.1 18 EVEGCLRDMSLEKVYYRRYSVCEAHLRALELLVDGRIQRFCQQ 60 69****************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 61 aa Download sequence |
MDGVEPARGP SSTAGGMEVE GCLRDMSLEK VYYRRYSVCE AHLRALELLV DGRIQRFCQQ 60 V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47070.1 | 1e-11 | SBP family protein |