PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH10633.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family C3H
Protein Properties Length: 283aa    MW: 29111.2 Da    PI: 11.5205
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH10633.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.96.2e-071536426
                ---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  4 elCrffartGtCkyGdrCkFaHg 26
                ++C+ffa+ G+C  G  C+F Hg
  PNH10633.1 15 VPCKFFAQ-GYCAKGRDCPFKHG 36
                69******.*************8 PP
2zf-CCCH26.89.3e-094566526
                --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                +C+ff++ G C+ G++C+F Hg
  PNH10633.1 45 PCKFFSQAGGCNKGANCQFLHG 66
                7********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MPRVTLHGIM SNSSVPCKFF AQGYCAKGRD CPFKHGSAAG SNGLPCKFFS QAGGCNKGAN  60
CQFLHGGVPA ARYMSFAPNT PAKPAGGRQS NSPAPARGRA AAAGSSPPRG RASSACRGRP  120
QQRPDSAPFG GAGGGGGILG NLLQRPQQFA GTLQLGGGQS ARVQVQVQQQ MVTTKPQLAV  180
HAYFLIGAYV VSCRVSGSGS LRQLGGAVGT RLGTRSSGTP DGCVVCDRFR SWCGHGPPLL  240
GRRAWAATER MERCHTHTTG HPARAMVAAS AVVLALLQAL VSS