PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH10222.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family GATA
Protein Properties Length: 479aa    MW: 48032.8 Da    PI: 8.1754
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH10222.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.24.1e-17432464133
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkk 33 
                 C+nC +t+Tp+WR gp+g++tLCnaCG++y+k 
  PNH10222.1 432 CRNCSATQTPQWRCGPEGPRTLCNACGVRYKKG 464
                 *******************************95 PP

Sequence ? help Back to Top
Protein Sequence    Length: 479 aa     Download sequence    
MAGMMLRAGS WGPVLGSAPV LGFIHDVEDV PFAATEATPS TPWPAVPGFV TGVRLAAALR  60
PGASNFTCNG ERLLHQVAPS VRAGGAWIPV AGIPATNRLD ARGATQDQPV SVFHPPSAEE  120
CAQLASPFAA PACQLPPLPG DAEAQRGPEL HQLSKGSHAC LKPQGSCGDA AELQAGDVAM  180
PASPARQPME TVASPTGRAP GPLPEAHQPD GPSLLLLGRG PAHAGHLSLA SMLPAQPGSC  240
GSGSTAEGED AHVPEPAAEQ PPQQQQQQQQ QQQQGGVCRV ASSAAFSTGS AAAAAASTRD  300
SLASAAAASL VADADAVSSK PPSAGTGADP LGSAPSAAGA ARPSVAASPK KRAAGPVAAG  360
PARKRRAGPA AAAAVAPVRG GGGGRDAEAS SDDDGDADYH AEPGSTAREV KRGRLGAAPK  420
TYTGKARTGV TCRNCSATQT PQWRCGPEGP RTLCNACGVR YKKGLPLDYI ERKKRQMGL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1350366KKRAAGPVAAGPARKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.11e-12GATA family protein