PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH10222.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | GATA | ||||||||
Protein Properties | Length: 479aa MW: 48032.8 Da PI: 8.1754 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 53.2 | 4.1e-17 | 432 | 464 | 1 | 33 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkk 33 C+nC +t+Tp+WR gp+g++tLCnaCG++y+k PNH10222.1 432 CRNCSATQTPQWRCGPEGPRTLCNACGVRYKKG 464 *******************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 479 aa Download sequence |
MAGMMLRAGS WGPVLGSAPV LGFIHDVEDV PFAATEATPS TPWPAVPGFV TGVRLAAALR 60 PGASNFTCNG ERLLHQVAPS VRAGGAWIPV AGIPATNRLD ARGATQDQPV SVFHPPSAEE 120 CAQLASPFAA PACQLPPLPG DAEAQRGPEL HQLSKGSHAC LKPQGSCGDA AELQAGDVAM 180 PASPARQPME TVASPTGRAP GPLPEAHQPD GPSLLLLGRG PAHAGHLSLA SMLPAQPGSC 240 GSGSTAEGED AHVPEPAAEQ PPQQQQQQQQ QQQQGGVCRV ASSAAFSTGS AAAAAASTRD 300 SLASAAAASL VADADAVSSK PPSAGTGADP LGSAPSAAGA ARPSVAASPK KRAAGPVAAG 360 PARKRRAGPA AAAAVAPVRG GGGGRDAEAS SDDDGDADYH AEPGSTAREV KRGRLGAAPK 420 TYTGKARTGV TCRNCSATQT PQWRCGPEGP RTLCNACGVR YKKGLPLDYI ERKKRQMGL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 350 | 366 | KKRAAGPVAAGPARKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32890.1 | 1e-12 | GATA family protein |