PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PNH10059.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
|
||||||||
Family | GATA | ||||||||
Protein Properties | Length: 209aa MW: 22927.1 Da PI: 6.4996 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 55.4 | 8.4e-18 | 155 | 185 | 1 | 31 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyr 31 C+ Cg+t+Tp+WR+gp g+ktLCnaCG++y PNH10059.1 155 CVECGATTTPQWREGPMGPKTLCNACGVRYV 185 *****************************95 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 209 aa Download sequence |
VKWFERRVNL EPSTKGIEES EREVFELDDT DVNPIGCISG KCRIIKAHNY EEAFSCCGNA 60 AGWFFCRGYF QQSSNSFVPY TPAEMGEDGE PSHRVASQRG GGGAGWANGD SDEEDEEDDS 120 DVPPPNPRRG QGQHHNPPPQ QQPPNKRQKA TGRTCVECGA TTTPQWREGP MGPKTLCNAC 180 GVRYVRSQQK AAGQKRSSGG QKNGQGRPQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G32890.1 | 2e-13 | GATA family protein |