PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH09969.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | GATA | ||||||||
Protein Properties | Length: 490aa MW: 48481.2 Da PI: 6.4892 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 51.4 | 1.5e-16 | 395 | 429 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+t++p+WRrgp +++LCnaCG ++r++++ PNH09969.1 395 CDHCGATESPQWRRGPPAKPMLCNACGTRFRRTNQ 429 9***************99999**********9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 490 aa Download sequence |
MPPHPATESM AMLNSFVVAA APLSERDCNG SARWAPCAAD ASSALAKAAP ALTMRRGASF 60 LDADDACLAL PDNRACFLIP EDSYLPGQEN CAAGPVTAPA AIPTPAAQPR HSLLPATALA 120 ACVAPPACAV APAAADNAST ATQPAAPTAT VQRAAAPTAA AEAATQPSPF ALLPLADASS 180 YGLGLGGIAG EEDFAACCCF EKAVQALEMV ERPPPPPACR QQRQHSGGGG GCCAGGEQEA 240 PRSYPCRVDS PVPSPAASQH AAASDSFFSA PPQQQQPAPE PTTTAWHAAE AEADAGDAAE 300 SSSAVPAHYA PVPAQERYER PFARAPSAAT FAPGRFVPYA AGVAAAAGVA FHGVGSAALG 360 GADGLDGEAD ASPVSPAAAP AMAVRAFHHR TGGPCDHCGA TESPQWRRGP PAKPMLCNAC 420 GTRFRRTNQL GPPGGNSVAA RAAAAAAAAA AAAPPMGKRG GGSCGISSKR DAAAAAGGAA 480 AKRGRTTAVY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17570.3 | 2e-11 | GATA family protein |