PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH09969.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

GATA

Protein Properties

Length: 490aa MW: 48481.2 Da PI: 6.4892

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH09969.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	51.4	1.5e-16	395	429	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+t++p+WRrgp +++LCnaCG ++r++++ PNH09969.1 395 CDHCGATESPQWRRGPPAKPMLCNACGTRFRRTNQ 429 9*************99999********9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MPPHPATESM AMLNSFVVAA APLSERDCNG SARWAPCAAD ASSALAKAAP ALTMRRGASF 60 LDADDACLAL PDNRACFLIP EDSYLPGQEN CAAGPVTAPA AIPTPAAQPR HSLLPATALA 120 ACVAPPACAV APAAADNAST ATQPAAPTAT VQRAAAPTAA AEAATQPSPF ALLPLADASS 180 YGLGLGGIAG EEDFAACCCF EKAVQALEMV ERPPPPPACR QQRQHSGGGG GCCAGGEQEA 240 PRSYPCRVDS PVPSPAASQH AAASDSFFSA PPQQQQPAPE PTTTAWHAAE AEADAGDAAE 300 SSSAVPAHYA PVPAQERYER PFARAPSAAT FAPGRFVPYA AGVAAAAGVA FHGVGSAALG 360 GADGLDGEAD ASPVSPAAAP AMAVRAFHHR TGGPCDHCGA TESPQWRRGP PAKPMLCNAC 420 GTRFRRTNQL GPPGGNSVAA RAAAAAAAAA AAAPPMGKRG GGSCGISSKR DAAAAAGGAA 480 AKRGRTTAVY

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MPPHPATESM AMLNSFVVAA APLSERDCNG SARWAPCAAD ASSALAKAAP ALTMRRGASF  60
LDADDACLAL PDNRACFLIP EDSYLPGQEN CAAGPVTAPA AIPTPAAQPR HSLLPATALA  120
ACVAPPACAV APAAADNAST ATQPAAPTAT VQRAAAPTAA AEAATQPSPF ALLPLADASS  180
YGLGLGGIAG EEDFAACCCF EKAVQALEMV ERPPPPPACR QQRQHSGGGG GCCAGGEQEA  240
PRSYPCRVDS PVPSPAASQH AAASDSFFSA PPQQQQPAPE PTTTAWHAAE AEADAGDAAE  300
SSSAVPAHYA PVPAQERYER PFARAPSAAT FAPGRFVPYA AGVAAAAGVA FHGVGSAALG  360
GADGLDGEAD ASPVSPAAAP AMAVRAFHHR TGGPCDHCGA TESPQWRRGP PAKPMLCNAC  420
GTRFRRTNQL GPPGGNSVAA RAAAAAAAAA AAAPPMGKRG GGSCGISSKR DAAAAAGGAA  480
AKRGRTTAVY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	2e-11	GATA family protein