PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH09754.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family CO-like
Protein Properties Length: 376aa    MW: 40903.3 Da    PI: 4.7713
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH09754.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box26.41.4e-08344541
    zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41
                 C  ++   ++++C +++ +lC+dC + +H +      Ht++p
  PNH09754.1  3 SCVVCSAP-ASIYCDNDKAMLCKDCDVRIHTSnavaarHTRRP 44
                7999*866.*********************7788999998876 PP
2CCT65.51.5e-22310354145
         CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqae 45 
                 Re+++ RY+eKrk+RkFeK+irY+sRKa+Ae RpR+KGrF+k++e
  PNH09754.1 310 REQRVARYREKRKNRKFEKTIRYASRKAYAEIRPRIKGRFAKKEE 354
                 9*****************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MASCVVCSAP ASIYCDNDKA MLCKDCDVRI HTSNAVAARH TRRPTCQGCQ GGVACYFNRH  60
ESAFLCEPCH SANPLSATHE VEPVVPLPTM EQELAMGEQQ LSFNAPCESV AQSAASPAAW  120
FVEEDKPSLV FVGEAAVMSP AGSEAVVPVM SASFEDFSFS APATFKEIKD KLEFESLELD  180
NGWMEMGFDF SDILSDAPSD AGLVPTFDAD AADALADALV PSFTELPSIE VPAPKPSRKR  240
AADASEEERT AKVPVVQPVV QQPSFLPQPA SIFFQTPQLL PQAVLLPPAA QPKNTAAYNA  300
ALAAGAYLTR EQRVARYREK RKNRKFEKTI RYASRKAYAE IRPRIKGRFA KKEEIEAWKA  360
AHGEDAVVPE ILDGEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24790.15e-18CO-like family protein