PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH09749.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family C3H
Protein Properties Length: 253aa    MW: 27158.1 Da    PI: 4.1442
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH09749.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.32.7e-08828425
                ---SGGGGTS--TTTTT-SS-S CS
     zf-CCCH  4 elCrffartGtCkyGdrCkFaH 25
                e C+++++ G+C yGd C++ H
  PNH09749.1  8 EVCKYWLA-GHCAYGDHCRYDH 28
                89******.************* PP
2zf-CCCH19.12.3e-06225247426
                 ---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                 elC+ ++  G C   ++C+FaHg
  PNH09749.1 225 ELCPEWSLHGRCAEEGSCPFAHG 247
                 8*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MEFWTTVEVC KYWLAGHCAY GDHCRYDHKR PDRLRGQQQQ QHALVRQEWQ QHSCSPSRGS  60
VNFWPPAACS SRADWSWPIR SDEAEGQGGD AAADYGQYGQ GNYGYEYGYG YEYGHDEREY  120
GEEGYGEGEY DEEGHGDEAY GKDGAGDEAG GAEANELPAA AAPAAASTAS AAAAEGLVMV  180
DDDLGLEQEL AAALDHASGT ATAAAAATAS PPAPVRDPVK LADLELCPEW SLHGRCAEEG  240
SCPFAHGLEC EVR