PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH09515.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family MYB_related
Protein Properties Length: 439aa    MW: 43516.3 Da    PI: 9.3292
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH09515.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.61.8e-1074117348
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      +WT+eE+ l+++a +++G + Wk+ a+ +g  R    + s+ qkyl
       PNH09515.1  74 AWTPEEEALFLKALELHGRD-WKRGAELIG-SRDHRAVASHAQKYL 117
                      7*****************77.*********.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    
MEVQQGDPAA PAARRPSSDG GAAASDAAAP SAGASADPSA DPSGASGDDD ERDRTNSGRR  60
RRKDVGKQRQ AGRAWTPEEE ALFLKALELH GRDWKRGAEL IGSRDHRAVA SHAQKYLVKM  120
CLTGQPLPAE VARSGRGYTL GGALLDPYSS AARSYGFRPE LLARLPPAEL QQALSGLDLD  180
KLPAMYGGRL PDDQAPVLPE RNRNASGGGA GGAEERSRKP PRAPAAKKRR KGAASSGAED  240
DGPDPAAAAA AAGTTAVAAT AAAIAGAVAA AAAAAGGGTG SCTPVHLAAA AASAAAAQAT  300
LTAATGGHLG LSAAPTPPTS GGGAAGAAPL HDAAPAAPTA ARLAAALAAL APPAAAAAAA  360
AAAPSAQTEY SRNRPRRELA GQRAHVGDTS ESLQLVKPHE FQGPPGSGAP MAQPFSVRVA  420
AGAMLAMDFH AHLSSYEVG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15964RRRRKD
2226232AKKRRKG
3227231KKRRK