PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH09457.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | SBP | ||||||||
Protein Properties | Length: 897aa MW: 90125.7 Da PI: 5.8829 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 36.3 | 1.5e-11 | 429 | 462 | 1 | 34 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EE CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvl 34 +Cqv+gC++dl+++keyh+r+++C+vh k ++ + PNH09457.1 429 VCQVPGCSKDLTHLKEYHQRYRICDVHIKLQQEM 462 6****************************98765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 897 aa Download sequence |
MDGLANLFND EVSGADRATS ITSSDLDPFL LQGDDQTWAV EDWNWDPFNM FAAPKEVPNL 60 ACCQALKRRK VADDTATSAA PQTQQQQAGA CQPCHGAGGQ RAGPPPPAAA ACCSMAAGLQ 120 QQHAPPQQPA GPVQAFNNLM PRVVETCAAS NMMCHGPNLV APPPAMALAA AGPMDFGGMA 180 GGMGMPGNMG MVGNMGMAGG MGMGGWPGMN GLGGSGPAAP AFFNGGGQGP LAALGWGAQP 240 MSLQMPNLAM SGFPGGHLQC APALPMQPYQ QGPNSGLFNQ HASMALPPSA LPSPALGCSG 300 DTTSLQGSAD NGNGKPPCCS GNRLNGGPSC SGGRQQADSS NKAPGAPPPN KQQQHAPKNG 360 GRGATAADLA AGGELSDFAI SDSEEEEEGG RGRAPAAAPA PRGAPLLPHQ VPRDVVALHD 420 LPDDSGLMVC QVPGCSKDLT HLKEYHQRYR ICDVHIKLQQ EMADNPLALA ESRLQLQAPW 480 ADKLQDLNAA HPPGARRDSI ATGTTGSSNA GGGGGGGGAD GVATVHLVDA AGVAVPYSDG 540 GGGGGDKGGA QHTAVVMFDG GGGGGGGGGG GSGQGGGGAG PRGSGTGALS AFQTLKVRLW 600 VAWVRGRQRF RAWASTVWTY LWDGPPDDAA HDTGATGPAA RAGAGAYETE VLENSISKIG 660 ALLAIGFGDA GAEIIAENIR NDGDINPMVP GRKTVAVFGF CDIRRFTDTT EVLQVDNLMA 720 ALGGLHQVDP HTSANNAAGH AAPAAAHRSR CGSACAAPGG GLGLGFGVKP EADEDVKVDL 780 RGGQGRPQQH HHHNNAGGGG SSCAELDPCE MCACTLPPLL LSIMASCTDC GRRRMCMEAD 840 AAAAGAGGRC ADCACGGARP TARADSGEVC CSPQHGTIFS ITALCQGCHA NRVLAVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69170.1 | 3e-06 | SBP family protein |