PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH09457.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family SBP
Protein Properties Length: 897aa    MW: 90125.7 Da    PI: 5.8829
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH09457.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP36.31.5e-11429462134
                 --SSTT-----TT--HHHHHTT--HHHHT-S-EE CS
         SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvl 34 
                 +Cqv+gC++dl+++keyh+r+++C+vh k ++ +
  PNH09457.1 429 VCQVPGCSKDLTHLKEYHQRYRICDVHIKLQQEM 462
                 6****************************98765 PP

Sequence ? help Back to Top
Protein Sequence    Length: 897 aa     Download sequence    
MDGLANLFND EVSGADRATS ITSSDLDPFL LQGDDQTWAV EDWNWDPFNM FAAPKEVPNL  60
ACCQALKRRK VADDTATSAA PQTQQQQAGA CQPCHGAGGQ RAGPPPPAAA ACCSMAAGLQ  120
QQHAPPQQPA GPVQAFNNLM PRVVETCAAS NMMCHGPNLV APPPAMALAA AGPMDFGGMA  180
GGMGMPGNMG MVGNMGMAGG MGMGGWPGMN GLGGSGPAAP AFFNGGGQGP LAALGWGAQP  240
MSLQMPNLAM SGFPGGHLQC APALPMQPYQ QGPNSGLFNQ HASMALPPSA LPSPALGCSG  300
DTTSLQGSAD NGNGKPPCCS GNRLNGGPSC SGGRQQADSS NKAPGAPPPN KQQQHAPKNG  360
GRGATAADLA AGGELSDFAI SDSEEEEEGG RGRAPAAAPA PRGAPLLPHQ VPRDVVALHD  420
LPDDSGLMVC QVPGCSKDLT HLKEYHQRYR ICDVHIKLQQ EMADNPLALA ESRLQLQAPW  480
ADKLQDLNAA HPPGARRDSI ATGTTGSSNA GGGGGGGGAD GVATVHLVDA AGVAVPYSDG  540
GGGGGDKGGA QHTAVVMFDG GGGGGGGGGG GSGQGGGGAG PRGSGTGALS AFQTLKVRLW  600
VAWVRGRQRF RAWASTVWTY LWDGPPDDAA HDTGATGPAA RAGAGAYETE VLENSISKIG  660
ALLAIGFGDA GAEIIAENIR NDGDINPMVP GRKTVAVFGF CDIRRFTDTT EVLQVDNLMA  720
ALGGLHQVDP HTSANNAAGH AAPAAAHRSR CGSACAAPGG GLGLGFGVKP EADEDVKVDL  780
RGGQGRPQQH HHHNNAGGGG SSCAELDPCE MCACTLPPLL LSIMASCTDC GRRRMCMEAD  840
AAAAGAGGRC ADCACGGARP TARADSGEVC CSPQHGTIFS ITALCQGCHA NRVLAVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69170.13e-06SBP family protein