PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH09070.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

E2F/DP

Protein Properties

Length: 647aa MW: 69836.6 Da PI: 8.6301

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH09070.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	84.5	8.6e-27	152	230	3	71
E2F_TDP 3 eksLrlltqkflklleksee.givtlnevakeLvse.............dvknkrRRiYDilNVLealnliekkekneirwkg 71 +k+Lr++++k ++ek+e+ g++t+neva+eLv+e d+kn+rRR+YD++NVL+a+++i+k ek+ei wkg PNH09070.1 152 SKGLRHFSMK---VCEKVEAkGRTTYNEVADELVAEmskveaankngqyDEKNIRRRVYDAINVLMAMDIIQK-EKKEILWKG 230 69******...***9************************************************.*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 647 aa Download sequence
MEEQLPKKDG PEAPAAAPLG DPQAGLAQSF AHELQELGLL EFAEEVNFAR LTDTPGVVFP 60 QSARAGAGPV GHNNPPPQPT QPYDLQQCHL ANQATEVATA RALQVLHLAK VSLHQLVTSY 120 NPRGAASAGT DGSSKRRKTS RGAEQSGSRS GSKGLRHFSM KVCEKVEAKG RTTYNEVADE 180 LVAEMSKVEA ANKNGQYDEK NIRRRVYDAI NVLMAMDIIQ KEKKEILWKG FPRLSHNTLD 240 RIKAERLAKI KEVEQKQLYL QDMIEQQKAL RKLLDRTASG GLNPSGTKLF LPFILVQAKP 300 DATVEVKISE DMMDVQFDFN QSPFQIHDDS HVLKKMAEHQ ARQQQQQQPF GNPLAGGLGM 360 PWQNMQGEEG GRKPGRKETG TAGNIVAAAA AAAAALTPLA DPALAQLAAA AAQAQGQGSA 420 YAAFYQQQML QQQQAQQQTQ QQQPEQAQPG HDAQQAPTQG QGQQQNQTQQ AQVQQGQAAP 480 QQQSQQLAPL NSLQALQAQL QQQQLQAQLQ QQQHARLPMP GALSLPPMAS LGPPSHQASQ 540 ASQAFGLSHA LPPHLQQASQ LGEPHAGQAQ QQQRQEQPQQ PQRQRQQPMG LPQLPPLHTP 600 QLSGLLPLPP LPMPQGVGQQ LSLSQPVGLQ GGGSVPAAPA AAFPLVA

Sequence ? help Back to Top

Protein Sequence Length: 647 aa Download sequence

MEEQLPKKDG PEAPAAAPLG DPQAGLAQSF AHELQELGLL EFAEEVNFAR LTDTPGVVFP  60
QSARAGAGPV GHNNPPPQPT QPYDLQQCHL ANQATEVATA RALQVLHLAK VSLHQLVTSY  120
NPRGAASAGT DGSSKRRKTS RGAEQSGSRS GSKGLRHFSM KVCEKVEAKG RTTYNEVADE  180
LVAEMSKVEA ANKNGQYDEK NIRRRVYDAI NVLMAMDIIQ KEKKEILWKG FPRLSHNTLD  240
RIKAERLAKI KEVEQKQLYL QDMIEQQKAL RKLLDRTASG GLNPSGTKLF LPFILVQAKP  300
DATVEVKISE DMMDVQFDFN QSPFQIHDDS HVLKKMAEHQ ARQQQQQQPF GNPLAGGLGM  360
PWQNMQGEEG GRKPGRKETG TAGNIVAAAA AAAAALTPLA DPALAQLAAA AAQAQGQGSA  420
YAAFYQQQML QQQQAQQQTQ QQQPEQAQPG HDAQQAPTQG QGQQQNQTQQ AQVQQGQAAP  480
QQQSQQLAPL NSLQALQAQL QQQQLQAQLQ QQQHARLPMP GALSLPPMAS LGPPSHQASQ  540
ASQAFGLSHA LPPHLQQASQ LGEPHAGQAQ QQQRQEQPQQ PQRQRQQPMG LPQLPPLHTP  600
QLSGLLPLPP LPMPQGVGQQ LSLSQPVGLQ GGGSVPAAPA AAFPLVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03415.1	8e-71	E2F/DP family protein