PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH09070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | E2F/DP | ||||||||
Protein Properties | Length: 647aa MW: 69836.6 Da PI: 8.6301 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 84.5 | 8.6e-27 | 152 | 230 | 3 | 71 |
E2F_TDP 3 eksLrlltqkflklleksee.givtlnevakeLvse.............dvknkrRRiYDilNVLealnliekkekneirwkg 71 +k+Lr++++k ++ek+e+ g++t+neva+eLv+e d+kn+rRR+YD++NVL+a+++i+k ek+ei wkg PNH09070.1 152 SKGLRHFSMK---VCEKVEAkGRTTYNEVADELVAEmskveaankngqyDEKNIRRRVYDAINVLMAMDIIQK-EKKEILWKG 230 69********...*******9****************************************************.*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 647 aa Download sequence |
MEEQLPKKDG PEAPAAAPLG DPQAGLAQSF AHELQELGLL EFAEEVNFAR LTDTPGVVFP 60 QSARAGAGPV GHNNPPPQPT QPYDLQQCHL ANQATEVATA RALQVLHLAK VSLHQLVTSY 120 NPRGAASAGT DGSSKRRKTS RGAEQSGSRS GSKGLRHFSM KVCEKVEAKG RTTYNEVADE 180 LVAEMSKVEA ANKNGQYDEK NIRRRVYDAI NVLMAMDIIQ KEKKEILWKG FPRLSHNTLD 240 RIKAERLAKI KEVEQKQLYL QDMIEQQKAL RKLLDRTASG GLNPSGTKLF LPFILVQAKP 300 DATVEVKISE DMMDVQFDFN QSPFQIHDDS HVLKKMAEHQ ARQQQQQQPF GNPLAGGLGM 360 PWQNMQGEEG GRKPGRKETG TAGNIVAAAA AAAAALTPLA DPALAQLAAA AAQAQGQGSA 420 YAAFYQQQML QQQQAQQQTQ QQQPEQAQPG HDAQQAPTQG QGQQQNQTQQ AQVQQGQAAP 480 QQQSQQLAPL NSLQALQAQL QQQQLQAQLQ QQQHARLPMP GALSLPPMAS LGPPSHQASQ 540 ASQAFGLSHA LPPHLQQASQ LGEPHAGQAQ QQQRQEQPQQ PQRQRQQPMG LPQLPPLHTP 600 QLSGLLPLPP LPMPQGVGQQ LSLSQPVGLQ GGGSVPAAPA AAFPLVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03415.1 | 8e-71 | E2F/DP family protein |