PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH08998.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family MYB_related
Protein Properties Length: 442aa    MW: 46598.3 Da    PI: 5.5488
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH08998.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.81.8e-114985341
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqck 41
                      W+ +E+  +v++++ lG+  W++Ia+ m+ gRt+ ++k
       PNH08998.1 49 TWSLQEERTFVQLHEHLGNA-WSAIASQMP-GRTAGEVK 85
                     5*******************.*********.****9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    
MPSSESSDAT CSVEYDEDDD EEEEEEVAAR RHTRRRSSES ERRRRRHITW SLQEERTFVQ  60
LHEHLGNAWS AIASQMPGRT AGEVKEGGGT ASGARSNVGG GPAAYRPLPG HPHVLLSLAA  120
TGPEGRTAAM PPPPQQQQPL GGGGGGGGGG GGGVFAAGRP TAAAPPILAA AAGQQQRYGG  180
AEGERMETRR LPGGQVAAAV DGGWRQQQGR YEADGGGWGG GAAQPGDGAD QSRAPPLQDS  240
HHQRQDEPSQ WRDDGGGRSS SWGAVGTAAT ASDGAGGTGG GGSNGWGAAW GPPSESPVPA  300
GAATRLLAED AVQWQHLQQQ QQQHQQQQLQ QQQQQQQQQH HHHQQQQQQE QFYQRQLKQQ  360
QEQHALAQAQ AAQAQAEARA AAEVARDVDV ALWQQRQAAA IREASSQAGM RGDVLPMGLQ  420
CLLGDAELRG CVADEACTAL WA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.13e-09MYB family protein