PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH08309.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family MYB_related
Protein Properties Length: 1250aa    MW: 124956 Da    PI: 7.47
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH08309.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding452.5e-142872147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r rWT +E+ ++++a k++G   W++I +++  ++t+ q++s+ qk+
       PNH08309.1 28 RERWTDDEHARFLEALKLYGRA-WRKIEEHVS-TKTAVQIRSHAQKF 72
                     78******************88.*********.************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1250 aa     Download sequence    
GLAAPQPEQQ QDGLKVKTRK PYIITKQRER WTDDEHARFL EALKLYGRAW RKIEEHVSTK  60
TAVQIRSHAQ KFINKLERNK DSGLAEDGEN ISIPPPRPKR KPSRPYPRKD FAGPDNSGSG  120
VADASGVNGG SGTFTCSQGT GLNYQQQSKL SLPTQPRSTS LLPPTDVLEQ PHLPLSVSLQ  180
QPRTLSPELA VAAAAAAAIK QHQLQQIVRP QASLQSAEVT EATVAAVAAA ASAAAAAAAA  240
AVVAAAGQQV QAHLQAHPPQ GFPFFGMPPS LLAQITLQNS PLEGMSWGNS GGGGGAYGHG  300
GGDSAVHART WEHGTTYDRR PHLHHHHHHH HHHHSLERQQ QQQLALAEAT ATTTDADNPV  360
TMMMGGSAMT RGRGISGGQE SRGSDGNSAV TEREGEGEEE DLAQEDGADG DRDGDGEGEG  420
DGDGEGDLAG LDAGGEDQAA QSHRADGKRT NGVSEADADR FASYWHMLGV NDDGRLAHAH  480
TAAAAAHAQR EGHHGHDHPH GHATRSLGTR TTSSGGGGRA KAGPKAHAHK EGATSSRDQH  540
KAARDASPSY SDMVNRDAGG KPAGRGVGSS DTNGSDSALR ETRNDTGVRE AQGSNPSNHN  600
NGNGSSGNGS GSNGNGSRSQ GHGSQGNGDG SSGNGHSGGS GGEGAGGSGG DGNGYSLKAS  660
HSPHTKHHHH HHHHVHAPPH SQVYDAGRYP SHHETQDRDG NGASGIGVRP LNSEDEGNTT  720
RRGCEGSGAA TPGAGSGGEE GGGGSQGSAG GDGCGRTGCG GGSRAGSDGG PSAGPPSKAA  780
GRGSGAAALS GGGVPRGGGG GARGTASGLT GGGSLGSGGG GAPRPEGALT LVLGLDRPPV  840
GQVAGSAFSV PPPSAMVRGA SADMGKVTTL LAQLQSHASL PLFPAAAPGV PPVFAQQPLL  900
APAAAAQQAF YASAAATASA MQLGLLGVAQ LQAQAGQAAP LALAKAPAAA AASLLPGASA  960
DARAALAISL AQVAAAPLGP AAAAAVQLPR VPELAELLRL GSNAAPALAN IGNGDGGGFD  1020
AAASVAAASA YVQLMALVTG AAPALASADP FRAVAGAARG GAALGDRAPG TLGLDSAVLS  1080
ALSLPQAPRD LLMQERLVAP VATVASLPSP VMQLVQASLP PAAPLQQRLQ PVPGLGMGSA  1140
REGDRAAIPS GGLPAPLPRR RPPAAFAAAL PSEPGLQSLL KRAGAEAPRA QQLIVPTASA  1200
PSPLGGLPPR PSPPHADARR ELPSASGWKR TAGSSGDEPG GGPPNKRAHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46830.11e-29MYB_related family protein