PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH07835.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | GATA | ||||||||
Protein Properties | Length: 789aa MW: 79644.5 Da PI: 7.8042 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 50.6 | 2.6e-16 | 738 | 769 | 1 | 32 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrk 32 C++Cgt +Tp WR gp g+ktLCnaCG++y k PNH07835.1 738 CTQCGTQTTPVWRAGPHGPKTLCNACGVRYMK 769 *****************************966 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 789 aa Download sequence |
MPMFDDNDTM LFGDTDFLGT MPACQCLAGE LELQVASFEC GGDLVGESPA NGKSFSLTKD 60 SGGSSLSGLA VADFGSADFN DFNVSLEVLA AADHYGHTVC GRQSTADSAA APSSARNTGM 120 GATGTWDPSS VQPAPRPPVA APAVAPAEPA HRREQGACVD GQQYSAPASY QQQQPYQQQQ 180 REQGPDSSDG DTSHSAGDGE TSGVGHGGKG LAAGSQSEES EDNMQGIASA GGNDEEHMSE 240 AMPNFGLSLS RLRQVPQSRH RREEQLAHRQ QQQEQQQHQV QAQARQQQQN PSMMTRAYSV 300 GNMALAGAGA GGAAPGSATF LDGQRRAQMF RSYSFISPDC LPEDFELGCG DGGGAGGGGG 360 GGGGGLLGAR GRCASLNETQ LRRQWLHEGE LLAPQLPPSV SELELLELPE DAVVEPPLRP 420 LGGSFSAGSA GMGGSGALHG GRRGPGGGGM MLFRGASGSS AGGGGSCDGP LPLPQPGTVK 480 RKIITSPSPL LHAHKPAKVR QAAAGACGGA GGGTGSTPKG QSPKRAKVGS AGLPLPPSTL 540 GAAWQQQDGS AAGVLAGWHP PPAAARGGGM MKSIRSVPAN MNSMAAGHGH GHGRFLDGIE 600 VAARPLGPPG ASDAVISPNC SAASAGTPYH GFGVARGAGS FAEPVAPAGR QVGGAHAAAA 660 AGPAKISKAR GAAVPPPPVV VPGTGLGLPF GGAPPSLGCF PEAGRRSMTP SVPKPRKRAS 720 PNGNPPKAPA PNPNGHCCTQ CGTQTTPVWR AGPHGPKTLC NACGVRYMKV AKGNVPPTPR 780 KQQQQQQHQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 440 | 448 | GGRRGPGGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24050.1 | 8e-07 | GATA family protein |