PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH07478.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

GATA

Protein Properties

Length: 891aa MW: 96518.2 Da PI: 9.4585

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH07478.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	42.7	7.5e-14	269	301	1	33
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkk 33 CsnCg+t+TplWRr++ n t+CnaCG+y + PNH07478.1 269 CSNCGVTHTPLWRRDKATNLTVCNACGIYKHTH 301 *****************************7766 PP

Sequence ? help Back to Top
Protein Sequence Length: 891 aa Download sequence
MANTGQGKRT YDEPLEKVQQ LTQPGYDEPC AADQQQLRMQ LLHQLQHQHQ HQHQRQHQQQ 60 LQQHQQQHQH QQQHQQRQQQ GQRMEPPRPS ATVTAGMIMC GLLPGTARGS ASSSPQYPEP 120 RPRKLPTAVH ELLADASEAN AAAASVMAIV AAPTNAAANG TVQLLALPSS AAMMAAAVTA 180 CDSAPALASV RMRGHSHSGG EAAGSSTAGS QPSSRSVPVS SSLAAHSSGA QQQHLPSSIA 240 PRGYKIPPPR QPPLPSLRPP RNHKGPLLCS NCGVTHTPLW RRDKATNLTV CNACGIYKHT 300 HGCERPVNHQ RQALQQQHLG RSPTQHTAAV TTSGRTGRTG PPPPRSPAAS QGDRRYVPYV 360 APPQTACLSA GAPAAGALPP SLKRGLAEAL EVGQLQHASP RAADGGRLFQ QRASDQQVKV 420 QLDDDRCCGA RPTRAASGGA VAVTRPWDKD AAAAACVGDR GREGAMLLRA EADDGQPGDQ 480 RPGGARRTRG EPHAAVGLCE GLGVGSGRRA ASSVCSEQQW LQEPAGGWMY QQVGEQRQEA 540 GPAARRPKVL QQLELQEGGP AGAQQQAAAH RPAIISRAAV SPVTSDVRRL QAMADGLQLA 600 RAGSARDAFV LELGPSEPHA WLPRGNPAAQ ERPRHRPRHD VANDGPPRKA VPEVLAGGSG 660 DNDGALKYLV DHIQRRRQLV GLDSAAPYQQ PTHPNQQPAQ YRSLEGADHG HVDGMHALQP 720 QVSLQPYRQP DQAVQYDDAP SMLQQVMQCL QQQQQLHQQQ QQLQQQQQQQ QQQQQQRQQQ 780 QLQQQQQQQQ QQLQQQQQQQ QQQQQLLQQQ QQQDNSVDGA HHRRAYDTIG SDVSLVPYPA 840 DGSTPTIEFA LLLLQLELQQ QQQQQQQQRP QGRMGRQAMG LGDYLAGAGR K

Sequence ? help Back to Top

Protein Sequence Length: 891 aa Download sequence

MANTGQGKRT YDEPLEKVQQ LTQPGYDEPC AADQQQLRMQ LLHQLQHQHQ HQHQRQHQQQ  60
LQQHQQQHQH QQQHQQRQQQ GQRMEPPRPS ATVTAGMIMC GLLPGTARGS ASSSPQYPEP  120
RPRKLPTAVH ELLADASEAN AAAASVMAIV AAPTNAAANG TVQLLALPSS AAMMAAAVTA  180
CDSAPALASV RMRGHSHSGG EAAGSSTAGS QPSSRSVPVS SSLAAHSSGA QQQHLPSSIA  240
PRGYKIPPPR QPPLPSLRPP RNHKGPLLCS NCGVTHTPLW RRDKATNLTV CNACGIYKHT  300
HGCERPVNHQ RQALQQQHLG RSPTQHTAAV TTSGRTGRTG PPPPRSPAAS QGDRRYVPYV  360
APPQTACLSA GAPAAGALPP SLKRGLAEAL EVGQLQHASP RAADGGRLFQ QRASDQQVKV  420
QLDDDRCCGA RPTRAASGGA VAVTRPWDKD AAAAACVGDR GREGAMLLRA EADDGQPGDQ  480
RPGGARRTRG EPHAAVGLCE GLGVGSGRRA ASSVCSEQQW LQEPAGGWMY QQVGEQRQEA  540
GPAARRPKVL QQLELQEGGP AGAQQQAAAH RPAIISRAAV SPVTSDVRRL QAMADGLQLA  600
RAGSARDAFV LELGPSEPHA WLPRGNPAAQ ERPRHRPRHD VANDGPPRKA VPEVLAGGSG  660
DNDGALKYLV DHIQRRRQLV GLDSAAPYQQ PTHPNQQPAQ YRSLEGADHG HVDGMHALQP  720
QVSLQPYRQP DQAVQYDDAP SMLQQVMQCL QQQQQLHQQQ QQLQQQQQQQ QQQQQQRQQQ  780
QLQQQQQQQQ QQLQQQQQQQ QQQQQLLQQQ QQQDNSVDGA HHRRAYDTIG SDVSLVPYPA  840
DGSTPTIEFA LLLLQLELQQ QQQQQQQQRP QGRMGRQAMG LGDYLAGAGR K