PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH07074.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

G2-like

Protein Properties

Length: 1977aa MW: 196405 Da PI: 6.5588

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH07074.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	78.3	9.4e-25	1166	1219	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +pr+ Wt+eLH rF+ +v+qL G e A+Pk+il m+v+gLt+e+v+SHLQkYRl PNH07074.1 1166 RPRMLWTHELHCRFMGVVSQL-GVETAVPKNILTQMNVEGLTRENVASHLQKYRL 1219 59*****************.9*****************************8 PP
2	Myb_DNA-binding	26.6	1.4e-08	1168	1218	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT e++ ++ +v qlG + +k I m+ +g+t++++ s++qky+ PNH07074.1 1168 RMLWTHELHCRFMGVVSQLGVEtaVPKNILTQMNvEGLTRENVASHLQKYR 1218 567***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 1977 aa Download sequence
MQNGGTPLGS QSSPGAQVPG LGTSRGLGVQ LDAAAALQLQ QLQQQQQQQA LLAHLVQVQT 60 QAQRSQGEDA ATAAARAILA LLGPSLAAAA ALQLSLPPAL QQQQQLQQAL GLGCVAAAGP 120 ASHEPCVMAP GEPRQGQLPQ PQPRTQLPAL DPMRQLQLPS QQQPPPAPGS SCHRIEPSQQ 180 QVQLAQLQLQ AAGLSGPQGS AALAGAAAAA TVSPAWQASV GAAAGSGGAT HWEALRGLGV 240 DPAVWAALAP AAAGSQQEEQ RRQQPLQQQD PQRQQLQQQD EQRQQQPQQP QQPQQPQSSG 300 ASGSGGGGGG SRSGSGSGSG SGNGSAVLQR SCSGLGQKHQ GGDGAGELGM YEHDAWAMPP 360 ASAAAAAGAG GHYHHRQHRQ HHQRSAGASR DGLRRVPSMG DAGCAGRELA APGARRVEHG 420 CEDSSSDADA DGDSRMWELR EAEGERQAEG EAEAEAEAEV EADEQVGQEC GQPPYCGERA 480 TDQHHGFAPG HGGFPPSNAA AVAQAQMPAS AAAPAPLQLL RCQQQQSQQQ SQQQSAGLSL 540 ARLQHAPAPP QPAPLLQTGQ ELPPAAAHAR PGTHPGPAPP DGRGSGNSSN RARASGHMGD 600 TSAPTVPGTA AAAGPSGGSG AAEAEAGAVA AQWPQPAGAA LPVAGAGAPG FAPGGGAGGS 660 LKRGLAEAVW QQSCGGSSPG GAEDDGDGRA GGPKHRHLNS PLQFRHASGT ASGSGSGTGP 720 IAIPAGLRNG PGPTRLGPRA SPPQQQLQHH QQQAGAAHQT HQSHHHHTHH HTHQSRRHHQ 780 HAADVKMEEE GQGEAAGAML TAEEEEAEER ERMDMEGDDG TAAEAGGGGL DMPQGGAARS 840 ASATLEEGSS HCGDSDGPAR EGGGSGGSGE GSGGGGSGGA GGSGGDGSGG GSGGDGSGGT 900 GSGDNAGGSG ASRATAGVGA SGAVGQAPGA SGAVGAPRAA AADAAAAALS QLLGPAAANA 960 AQSHSPVTGR AAGPRPAGAG TAAAAGACAK GGAHSHQHHH NDTTATSQAP RASPLLVLHP 1020 PRNPPQEQSA AAASRRSPAP QEQPESGQQQ QPPPQQQPQA RDPQPVAARR SQQQQSQSQP 1080 PQPRTESGFC GAVGAASGFG GSGGPGARTG PTAGISTGTA SGILGGGGGG GGGGDGDGDG 1140 DGGDGDGGVT GTSGGGEGGG GRGSKRPRML WTHELHCRFM GVVSQLGVET AVPKNILTQM 1200 NVEGLTRENV ASHLQKYRLY LRRLAGVPAT SSIPPHLIDS VQAQAVRAHL LKRQQQVHQA 1260 AALHALQSMR PTEGGGVGSV GGSGGVSVGA GASGALMSAV AAAAAGGASG LVAALQAPAA 1320 AAGLAALGLA AAAAQQQQQQ QAQAQQLAPY LQQLQQLQQL QQLQQLQQLQ QLQQLQQLQQ 1380 LQALSGAGGA AGGAAAGGAL GGLGLEAAAT GGLGLLQLAN LNALLPSATS AAAPAAAASQ 1440 EAAPASASPL GATDRAAAAP LAAPVAVLVA ATPASVPVAA AGGASGLAAV GGATWQQLQQ 1500 WQAQQQLAAL VALAQSQQQQ QQLSLHVQQQ WQLQQQLAQH QTLAQGLSML TQQPQGGGSG 1560 GGGSQAATQA RPGSEAQPPE AAMPPPPPPQ QQVVAPVTLP PQLQQASSGV CVVQQGPADV 1620 GAGVLYGGYG GGAAAAGAGP GAAVGRLGQG PEQGSAGGGA NVAAGTAAAL QQLYAAQQQQ 1680 HVQYLLQQQQ QQQQRQQQQQ QQAGSLAGLG LAGFGLGSLA GSANAQQQQQ QQQLLQQLQL 1740 QQLQQQQLQQ QQLQQQQLQQ QQLQQQQQQQ QQLQQHLQDQ QQQQQQQGQG QGGHLGTDSG 1800 GAGVGGAGQA SLATFAFAWD GGAGALQQQQ QQQQQHELHE QHEQHHHHHH HQHHHHHHQQ 1860 QHQVSAPASR SGHREQAGPE ALLLTGPGGA QMSSGDAYHG ATARPHERPS GSDDGRLGGG 1920 GRSSGGSGGG DSGGDDDDGC GGGGAVSSGS LDYQLPPLSQ LLNPSGGGHS PSSFLST

Sequence ? help Back to Top

Protein Sequence Length: 1977 aa Download sequence

MQNGGTPLGS QSSPGAQVPG LGTSRGLGVQ LDAAAALQLQ QLQQQQQQQA LLAHLVQVQT  60
QAQRSQGEDA ATAAARAILA LLGPSLAAAA ALQLSLPPAL QQQQQLQQAL GLGCVAAAGP  120
ASHEPCVMAP GEPRQGQLPQ PQPRTQLPAL DPMRQLQLPS QQQPPPAPGS SCHRIEPSQQ  180
QVQLAQLQLQ AAGLSGPQGS AALAGAAAAA TVSPAWQASV GAAAGSGGAT HWEALRGLGV  240
DPAVWAALAP AAAGSQQEEQ RRQQPLQQQD PQRQQLQQQD EQRQQQPQQP QQPQQPQSSG  300
ASGSGGGGGG SRSGSGSGSG SGNGSAVLQR SCSGLGQKHQ GGDGAGELGM YEHDAWAMPP  360
ASAAAAAGAG GHYHHRQHRQ HHQRSAGASR DGLRRVPSMG DAGCAGRELA APGARRVEHG  420
CEDSSSDADA DGDSRMWELR EAEGERQAEG EAEAEAEAEV EADEQVGQEC GQPPYCGERA  480
TDQHHGFAPG HGGFPPSNAA AVAQAQMPAS AAAPAPLQLL RCQQQQSQQQ SQQQSAGLSL  540
ARLQHAPAPP QPAPLLQTGQ ELPPAAAHAR PGTHPGPAPP DGRGSGNSSN RARASGHMGD  600
TSAPTVPGTA AAAGPSGGSG AAEAEAGAVA AQWPQPAGAA LPVAGAGAPG FAPGGGAGGS  660
LKRGLAEAVW QQSCGGSSPG GAEDDGDGRA GGPKHRHLNS PLQFRHASGT ASGSGSGTGP  720
IAIPAGLRNG PGPTRLGPRA SPPQQQLQHH QQQAGAAHQT HQSHHHHTHH HTHQSRRHHQ  780
HAADVKMEEE GQGEAAGAML TAEEEEAEER ERMDMEGDDG TAAEAGGGGL DMPQGGAARS  840
ASATLEEGSS HCGDSDGPAR EGGGSGGSGE GSGGGGSGGA GGSGGDGSGG GSGGDGSGGT  900
GSGDNAGGSG ASRATAGVGA SGAVGQAPGA SGAVGAPRAA AADAAAAALS QLLGPAAANA  960
AQSHSPVTGR AAGPRPAGAG TAAAAGACAK GGAHSHQHHH NDTTATSQAP RASPLLVLHP  1020
PRNPPQEQSA AAASRRSPAP QEQPESGQQQ QPPPQQQPQA RDPQPVAARR SQQQQSQSQP  1080
PQPRTESGFC GAVGAASGFG GSGGPGARTG PTAGISTGTA SGILGGGGGG GGGGDGDGDG  1140
DGGDGDGGVT GTSGGGEGGG GRGSKRPRML WTHELHCRFM GVVSQLGVET AVPKNILTQM  1200
NVEGLTRENV ASHLQKYRLY LRRLAGVPAT SSIPPHLIDS VQAQAVRAHL LKRQQQVHQA  1260
AALHALQSMR PTEGGGVGSV GGSGGVSVGA GASGALMSAV AAAAAGGASG LVAALQAPAA  1320
AAGLAALGLA AAAAQQQQQQ QAQAQQLAPY LQQLQQLQQL QQLQQLQQLQ QLQQLQQLQQ  1380
LQALSGAGGA AGGAAAGGAL GGLGLEAAAT GGLGLLQLAN LNALLPSATS AAAPAAAASQ  1440
EAAPASASPL GATDRAAAAP LAAPVAVLVA ATPASVPVAA AGGASGLAAV GGATWQQLQQ  1500
WQAQQQLAAL VALAQSQQQQ QQLSLHVQQQ WQLQQQLAQH QTLAQGLSML TQQPQGGGSG  1560
GGGSQAATQA RPGSEAQPPE AAMPPPPPPQ QQVVAPVTLP PQLQQASSGV CVVQQGPADV  1620
GAGVLYGGYG GGAAAAGAGP GAAVGRLGQG PEQGSAGGGA NVAAGTAAAL QQLYAAQQQQ  1680
HVQYLLQQQQ QQQQRQQQQQ QQAGSLAGLG LAGFGLGSLA GSANAQQQQQ QQQLLQQLQL  1740
QQLQQQQLQQ QQLQQQQLQQ QQLQQQQQQQ QQLQQHLQDQ QQQQQQQGQG QGGHLGTDSG  1800
GAGVGGAGQA SLATFAFAWD GGAGALQQQQ QQQQQHELHE QHEQHHHHHH HQHHHHHHQQ  1860
QHQVSAPASR SGHREQAGPE ALLLTGPGGA QMSSGDAYHG ATARPHERPS GSDDGRLGGG  1920
GRSSGGSGGG DSGGDDDDGC GGGGAVSSGS LDYQLPPLSQ LLNPSGGGHS PSSFLST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59570.1	3e-24	G2-like family protein