PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH06884.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

ERF

Protein Properties

Length: 1517aa MW: 154934 Da PI: 7.1788

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH06884.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	23.8	1.1e-07	110	160	2	53
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtae....eAakaaiaarkkl 53 y+GV++++ +++W A+I++ k+ +lg+f + eAa a++ a+ ++ PNH06884.1 110 AYRGVSFNRPNNSWHARIKVG-----GKNKHLGHFAHTDqgeiEAACAYDDAATAY 160 69******************4.....499999999875567779999999998766 PP

Sequence ? help Back to Top
Protein Sequence Length: 1517 aa Download sequence
TMAPPPAHPT YRFISKVRLD AERNQLWRAQ VRVKGADGSV KIHNGGKWLD PRKAALQADD 60 LLVCLYGEEK PLNLPDEMPD ERRAALAVMD VEELKVELLS GPIFASGGSA YRGVSFNRPN 120 NSWHARIKVG GKNKHLGHFA HTDQGEIEAA CAYDDAATAY LHEEKRFLNF PAGKPPLPAV 180 SSRRRRGIGR RWHGADEGWR PSITIKQLLL GIQELLDTPN PQSPAQSDAF VLFTQQTAEY 240 RKKVKRQAQQ YPPPSLGDLL QTAPRQGRPP DPPPNRLPAD GPRRALNPTA AAQPVADAGG 300 AAAAAAAAAA SGGGSGGGDR GRGGGGGAAL LQVYPTAVTA AAAAMEAAAG VGGGGGGAAG 360 LQDGFAFGAV GAMGTDRFSG RPVLLRTTTD VGREVAAWQQ HQQQHPSGNS AVYNPSLAMS 420 GVARSRLQEE RKAWRKDKPF GFHARPETAE DGSINLMKWK CHIPGKQATD WEGGFYPLAM 480 EFSDDYPTKP PKCKFPPGFF HPNIYPSGTV CLSILNEVRR GPWVAGGDRM PPPPLPPRAS 540 ALMAPGLFSV IPPARSPPGN STSSSTRPLF DEDRRPQPIR GGSDGAAAAD DDGDDDGGPL 600 IPLKLLRSGV DPLSLLHEVL PDLISPLEEE PLPRGQRALA FDELFQGDPH DPGFGAGGSD 660 AFDEASGPGH HGPAPLEERQ LLPPRHDQPT LRQLGLQLAA LQPQQVRQPA RPPRLPLPPL 720 PPQQLQPHGQ ERRQPTVRRS SQGAVIPASA GGAYRGRRGG SGGGGGSDYG KGSGGYGGGS 780 AGCGYSGGGG SPGGGYGGDG SAGSVYGGGD GGYLDGGLTS PERFAKSPRA SMDNRSPFRS 840 LPLPAAAQAH GGPHHLLGPA AGGSAGVPSV EPSSPTFHPE WAQGPMDGPG STRDLSQLPD 900 GNTSSASLAG LRRSRTLAEA PRDAGPSSPL ITGRLMLRTF TLPPSMRLAD TAAAAVPQPP 960 SMMQVAPSTA DMAAEEMAEQ LMRGSWSAGQ SYGAGGGAGE LVAAPPPGGG IAGGMRGSWS 1020 AGDAVPLPLV LRQYLQQQTQ QQQEHQPFYQ QQQQPQQQEP HYQHEQQHQQ QHQHQHQHQH 1080 QQQPQQHQQQ QHQSGDVLAM HLMPPPLPSY QLSAALLPAS PPGLFQQHQQ QHQQLQQLRQ 1140 LYQQQQQQQQ QQQQQQPEAA SVARLRPPPL RLYYAAHDGA SSHSATPSPS LYGGSSTTPS 1200 PYGTATQQLY GGGVDFQGLS LDQGGAPNSA TAAAAAAVAV AATGSPAGGS GDGFGGLGGV 1260 GGGIGGTGDA GGGGGGGQAG VHLWAMPPDA LQGPGLGVGM PPRAMHAPGG AGGASTHPTI 1320 SATSATGGAA TASSRSDSLE GRVSLEGGMA GVGGSSASRS GVGRRNGAGG VGGGPASGSA 1380 DGSAGGGAGG GASGSGPGSG SAGGGGGPGS GSGPVSDTAN DGGAGVFYGI SDGRGDDSGG 1440 GGAAFGAPPL LAAGGAAGAD PAAAATAVPA AAAAAVPGQG LEGMGLMEAQ APEDSQPTPT 1500 LKYLPPPSDP DFPTNRR

Sequence ? help Back to Top

Protein Sequence Length: 1517 aa Download sequence

TMAPPPAHPT YRFISKVRLD AERNQLWRAQ VRVKGADGSV KIHNGGKWLD PRKAALQADD  60
LLVCLYGEEK PLNLPDEMPD ERRAALAVMD VEELKVELLS GPIFASGGSA YRGVSFNRPN  120
NSWHARIKVG GKNKHLGHFA HTDQGEIEAA CAYDDAATAY LHEEKRFLNF PAGKPPLPAV  180
SSRRRRGIGR RWHGADEGWR PSITIKQLLL GIQELLDTPN PQSPAQSDAF VLFTQQTAEY  240
RKKVKRQAQQ YPPPSLGDLL QTAPRQGRPP DPPPNRLPAD GPRRALNPTA AAQPVADAGG  300
AAAAAAAAAA SGGGSGGGDR GRGGGGGAAL LQVYPTAVTA AAAAMEAAAG VGGGGGGAAG  360
LQDGFAFGAV GAMGTDRFSG RPVLLRTTTD VGREVAAWQQ HQQQHPSGNS AVYNPSLAMS  420
GVARSRLQEE RKAWRKDKPF GFHARPETAE DGSINLMKWK CHIPGKQATD WEGGFYPLAM  480
EFSDDYPTKP PKCKFPPGFF HPNIYPSGTV CLSILNEVRR GPWVAGGDRM PPPPLPPRAS  540
ALMAPGLFSV IPPARSPPGN STSSSTRPLF DEDRRPQPIR GGSDGAAAAD DDGDDDGGPL  600
IPLKLLRSGV DPLSLLHEVL PDLISPLEEE PLPRGQRALA FDELFQGDPH DPGFGAGGSD  660
AFDEASGPGH HGPAPLEERQ LLPPRHDQPT LRQLGLQLAA LQPQQVRQPA RPPRLPLPPL  720
PPQQLQPHGQ ERRQPTVRRS SQGAVIPASA GGAYRGRRGG SGGGGGSDYG KGSGGYGGGS  780
AGCGYSGGGG SPGGGYGGDG SAGSVYGGGD GGYLDGGLTS PERFAKSPRA SMDNRSPFRS  840
LPLPAAAQAH GGPHHLLGPA AGGSAGVPSV EPSSPTFHPE WAQGPMDGPG STRDLSQLPD  900
GNTSSASLAG LRRSRTLAEA PRDAGPSSPL ITGRLMLRTF TLPPSMRLAD TAAAAVPQPP  960
SMMQVAPSTA DMAAEEMAEQ LMRGSWSAGQ SYGAGGGAGE LVAAPPPGGG IAGGMRGSWS  1020
AGDAVPLPLV LRQYLQQQTQ QQQEHQPFYQ QQQQPQQQEP HYQHEQQHQQ QHQHQHQHQH  1080
QQQPQQHQQQ QHQSGDVLAM HLMPPPLPSY QLSAALLPAS PPGLFQQHQQ QHQQLQQLRQ  1140
LYQQQQQQQQ QQQQQQPEAA SVARLRPPPL RLYYAAHDGA SSHSATPSPS LYGGSSTTPS  1200
PYGTATQQLY GGGVDFQGLS LDQGGAPNSA TAAAAAAVAV AATGSPAGGS GDGFGGLGGV  1260
GGGIGGTGDA GGGGGGGQAG VHLWAMPPDA LQGPGLGVGM PPRAMHAPGG AGGASTHPTI  1320
SATSATGGAA TASSRSDSLE GRVSLEGGMA GVGGSSASRS GVGRRNGAGG VGGGPASGSA  1380
DGSAGGGAGG GASGSGPGSG SAGGGGGPGS GSGPVSDTAN DGGAGVFYGI SDGRGDDSGG  1440
GGAAFGAPPL LAAGGAAGAD PAAAATAVPA AAAAAVPGQG LEGMGLMEAQ APEDSQPTPT  1500
LKYLPPPSDP DFPTNRR