PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH06799.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

HSF

Protein Properties

Length: 415aa MW: 43500.7 Da PI: 6.4736

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH06799.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	108.8	4.1e-34	11	103	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl k+y++++d+e+++++sw ++g+sfvv+++ efa+++Lpk+Fkh+nf+SFvRQLn+YgF+kv+ ++ weF++++F +g+ke+l+ i+ PNH06799.1 11 FLIKTYDLVDDAETESIVSWGADGSSFVVWKPPEFARDLLPKHFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEHFVRGRKEDLRGIH 98 9**************************************************************999.........**************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+k + PNH06799.1 99 RRKPS 103 975 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MTNPANQPPP FLIKTYDLVD DAETESIVSW GADGSSFVVW KPPEFARDLL PKHFKHNNFS 60 SFVRQLNTYG FRKVDPDRWE FANEHFVRGR KEDLRGIHRR KPSTTAAQPH PGGSGAATPM 120 GAGGGGGNPH HALHAALPSN ALVAAGGAAP AIELGAYGGF REEIDGLKRD KSVLMVELVR 180 VRQQQQNSDA KMREVLARLE STEQKQQTMI NMFAAAFKNP AVFQRMLASL AGGGIQRIAH 240 APTPALPLLP NSHPGAAALA MPLAMGQHGC GGGGGAPPHD PLGSLALHPA HAHHHHHLLS 300 SLASAAPPPG LALPVNDNPT VSSPDDNGHN GGHNGHNDPD DDDAHMGGGL APMDHLMHSL 360 QAMPSGDLAL QDSDFADDVW AQIMSAASAQ MPDGGGGGGG GSGLDLPELA AVLRE

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MTNPANQPPP FLIKTYDLVD DAETESIVSW GADGSSFVVW KPPEFARDLL PKHFKHNNFS  60
SFVRQLNTYG FRKVDPDRWE FANEHFVRGR KEDLRGIHRR KPSTTAAQPH PGGSGAATPM  120
GAGGGGGNPH HALHAALPSN ALVAAGGAAP AIELGAYGGF REEIDGLKRD KSVLMVELVR  180
VRQQQQNSDA KMREVLARLE STEQKQQTMI NMFAAAFKNP AVFQRMLASL AGGGIQRIAH  240
APTPALPLLP NSHPGAAALA MPLAMGQHGC GGGGGAPPHD PLGSLALHPA HAHHHHHLLS  300
SLASAAPPPG LALPVNDNPT VSSPDDNGHN GGHNGHNDPD DDDAHMGGGL APMDHLMHSL  360
QAMPSGDLAL QDSDFADDVW AQIMSAASAQ MPDGGGGGGG GSGLDLPELA AVLRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	4e-67	HSF family protein