PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH06596.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

C2H2

Protein Properties

Length: 386aa MW: 40294.9 Da PI: 5.1256

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH06596.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.9	3.6e-05	170	194	1	23
EEETTTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt..H 23 + C+ C+k +s+ +L+ H+++ H PNH06596.1 170 FFCEVCDKQYSTAKQLEEHLSSydH 194 67*****************987555 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MNPLGAQPVV AVIDPRLAAP RGDQFTNAFQ ESRRRGLDDD EDENWLARPG VGPAEADDWG 60 AEAGTSVPIA QTNIGFRLLQ KMGWKEGKGL GKQEDGIVEP IRAGVEAGVR MGLGKQEEDD 120 THTTGATAAR RRLEVEVAAT EDEEASRKRG AVAEVLQKRA EDVKEMLQTF FCEVCDKQYS 180 TAKQLEEHLS SYDHQHRKRL AETKAAMAER NRGDRQRREQ KVADKEMAKL QKQIETAQQR 240 SRQQQGGGAP NAVAAAAPPL PDESAPPLPD EPPPLPDGPP PPLPGVSGQA AVSAVPPQPE 300 APGSSGVAAA PEVVVPGTTG ISFGLGGSGA GRGGLAGLGG RGGGLARGGL KRPGGTVGLG 360 GRPVKAATAP RPGLAGFGLD SDDEES

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MNPLGAQPVV AVIDPRLAAP RGDQFTNAFQ ESRRRGLDDD EDENWLARPG VGPAEADDWG  60
AEAGTSVPIA QTNIGFRLLQ KMGWKEGKGL GKQEDGIVEP IRAGVEAGVR MGLGKQEEDD  120
THTTGATAAR RRLEVEVAAT EDEEASRKRG AVAEVLQKRA EDVKEMLQTF FCEVCDKQYS  180
TAKQLEEHLS SYDHQHRKRL AETKAAMAER NRGDRQRREQ KVADKEMAKL QKQIETAQQR  240
SRQQQGGGAP NAVAAAAPPL PDESAPPLPD EPPPLPDGPP PPLPGVSGQA AVSAVPPQPE  300
APGSSGVAAA PEVVVPGTTG ISFGLGGSGA GRGGLAGLGG RGGGLARGGL KRPGGTVGLG  360
GRPVKAATAP RPGLAGFGLD SDDEES