PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH06414.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family C3H
Protein Properties Length: 463aa    MW: 49681.1 Da    PI: 9.6013
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH06414.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH37.63.6e-12143168227
                 -S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHgp 27 
                 kt+lC+++a +G C++G+rC FaHg+
  PNH06414.1 143 KTKLCKNWADGGGCPRGARCAFAHGE 168
                 8***********************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 463 aa     Download sequence    
MGTAARSEAA ARSSTRASRA TRRFTWLQRP RLLPTIGCLR RRQMPCCSLR TGPLSPLLQA  60
AQPGCTLCRD DLPLCQPHSF SSQRNRYSRS SSPHARPPWA QPLSQPSDAQ SYIVVYTGPG  120
IPHGPSPPVH RTCHAQEALP LHKTKLCKNW ADGGGCPRGA RCAFAHGEAE LRILPAAVAS  180
RQHQPPPLPP GAASPPVAQR PAAAAAAAAA PSDQAELDAP PGLLASTGSC KTKICQAFSY  240
HGNCRFGRSC IYIHPGEDDE DTPQVVPMRV PPIAHHQPLP RQVPPRPTPP AAPPAPLPPP  300
ISPPWALPPA ALDPASSALV VELLKYERTG NRADAIEASR QQLRECGRAM TREQLARLVD  360
DAAIGRLSPQ LLQTLLRVVV DRAVHGDWTL LRWDHRPPGT FVTCGLLHKV GLAGTAAIVK  420
AGAADEDAVL QRVLGVVRMI REKRPSALVD VMDPADLGMS SYM