PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH06414.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | C3H | ||||||||
Protein Properties | Length: 463aa MW: 49681.1 Da PI: 9.6013 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 37.6 | 3.6e-12 | 143 | 168 | 2 | 27 |
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 kt+lC+++a +G C++G+rC FaHg+ PNH06414.1 143 KTKLCKNWADGGGCPRGARCAFAHGE 168 8***********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 463 aa Download sequence |
MGTAARSEAA ARSSTRASRA TRRFTWLQRP RLLPTIGCLR RRQMPCCSLR TGPLSPLLQA 60 AQPGCTLCRD DLPLCQPHSF SSQRNRYSRS SSPHARPPWA QPLSQPSDAQ SYIVVYTGPG 120 IPHGPSPPVH RTCHAQEALP LHKTKLCKNW ADGGGCPRGA RCAFAHGEAE LRILPAAVAS 180 RQHQPPPLPP GAASPPVAQR PAAAAAAAAA PSDQAELDAP PGLLASTGSC KTKICQAFSY 240 HGNCRFGRSC IYIHPGEDDE DTPQVVPMRV PPIAHHQPLP RQVPPRPTPP AAPPAPLPPP 300 ISPPWALPPA ALDPASSALV VELLKYERTG NRADAIEASR QQLRECGRAM TREQLARLVD 360 DAAIGRLSPQ LLQTLLRVVV DRAVHGDWTL LRWDHRPPGT FVTCGLLHKV GLAGTAAIVK 420 AGAADEDAVL QRVLGVVRMI REKRPSALVD VMDPADLGMS SYM |