PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH06274.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | MYB | ||||||||
Protein Properties | Length: 111aa MW: 12560.4 Da PI: 10.0247 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.6 | 2.9e-18 | 7 | 53 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 r +WT+eEd ll+++v +lG g W++ ar+++ gRt+ qc rw+ +l PNH06274.1 7 REKWTPEEDSLLIKLVGELGAGKWASLARHLP-GRTDQQCMGRWRRHL 53 789*****************************.************986 PP | |||||||
2 | Myb_DNA-binding | 44.4 | 3.7e-14 | 59 | 100 | 1 | 44 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 +++W++eEd ll +++++G W++Ia+ + +Rt+ qc+ rw PNH06274.1 59 KDAWSAEEDSLLQALHQKHGAC-WSLIAKALA-HRTPQQCRGRW 100 689*****************99.*********.**********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 111 aa Download sequence |
VNPNICREKW TPEEDSLLIK LVGELGAGKW ASLARHLPGR TDQQCMGRWR RHLDPSIRKD 60 AWSAEEDSLL QALHQKHGAC WSLIAKALAH RTPQQCRGRW CILTGAGKSK Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G02320.2 | 1e-26 | MYB family protein |