PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH06229.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

G2-like

Protein Properties

Length: 1334aa MW: 132285 Da PI: 6.4038

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH06229.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	84	1.6e-26	878	931	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W++eLH+rF++a+ qL G+++A+Pk+il+lm+v+gLt+e+v+SHLQkYR+ PNH06229.1 878 KPRINWSQELHARFLNAMFQL-GIKNAVPKNILQLMNVEGLTRENVASHLQKYRI 931 79*****************.******************************6 PP
2	Myb_DNA-binding	33.4	1e-10	882	930	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 +W++e++ ++++a qlG + +k I + m+ +g+t++++ s++qky+ PNH06229.1 882 NWSQELHARFLNAMFQLGIKnaVPKNILQLMNvEGLTRENVASHLQKYR 930 8*****************9*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 1334 aa Download sequence
MTRVLAPTLP VSNYHFNSLA DADAKGLQAP ALLRSARSGR DSGACPMVAQ SQAEGSTSTS 60 GVNGLIPLAR YNDRASSAFT AYVRPWSASL AGADTAIEPA ATAAASNGGG SCNADPPNRH 120 NHHYSNGHNG HYGHGHNVHG HSQGHGHGHY NSPPTYSRRH DAAGSNGSSG TEDHLQPQQQ 180 HPHQQHQPQH QQPQQHGHAR HLYGAHSALL HARSHAQHGS SSSHHPHHHQ PNPSRRLNEL 240 AAAAAAAASG SGSGSDSPCD GLEKSEDLYD RRRGPSTEND TDPDQDHQHH PDRDTKSASL 300 EPSSNADCDA AEPAAATDSG GGGGGGGGGG GGSDGSGDSG GGSPGQSGHE HAREHGHGQG 360 GQSSDTEQRS APGCGPGSAD GSAVAAAVTM LEMSQAGGRG GSTEDNGGNG ANEATARGSG 420 SGPVSLLASA AAAAAAADAT PAPSPAQQQP QQLLLQQLLA SQQQQQQQQL QQQQQLASAG 480 GAPQPLLDLA TLLSGAGGDN VAQQQQHLQQ QLAVASKEQH QLQQALQHQQ QHLQMLVQMQ 540 QALSSGLPAA LTTGLSGLAP LGGLGALPAL GLGAGGVLGQ ALGLMGPQSL AGPGRLAALL 600 GGVAASAAPA AASSPGSLPP TAAPQQQPQP PVSRLASTLP QQQLGQQPQE QTQLRLPQQD 660 PVPQQPQQPQ QPQQPQQPPQ QQQPQHHLPD PSGPQDSNSS GAAAVAAAPS SHAPSPAPRS 720 PPYKQCTDIT DAALLEDDET DEAEAMEEME DREYDRDSEM TEGDGLEAYL EERMSYSPGE 780 GETDKACQVS LIGAPPLGFG IGASGRGASG GGASADGNGG GGGGGSRGGV KRKASALTDG 840 TSSGGAYNSN GGGSCGEEQN GSPAVDGADA SCKQAPKKPR INWSQELHAR FLNAMFQLGI 900 KNAVPKNILQ LMNVEGLTRE NVASHLQKYR ILLKRHAQLP ANAPLNPENL RKLDVVQQAV 960 QQTMHQSLGS ASLINAAVGG CTLTYQDLLS QLTAMTRHGP APPPAAAAAV PAVAAVAVAP 1020 SAVAATIAAV PPPVAVMALQ GLQRLTAVPL SVAAAAAATA AASGAAAAAG VVGVLAAAAA 1080 GGGSGVVPLP LALCSVPVGG LTTLSALTGL NALTSLTGLN GLNGLNGLNG LNGLNGLSGL 1140 STIGGLNGVL TGLNGIGPLA AAAGLNGIGP LAAAAGLGGL SGIGGLAALP VALGSGLPGA 1200 LPAGLASGLS GLALGPTGLP GLAGLNGLAG LGLSPVLGLG GLSTGTLAAL VANASGAASA 1260 AAAGGGMGAA ERGGGGIRGA AIELPVTAAG ALQLQQLRQL QQLQQQQQLQ QLQQLQLQQQ 1320 GRGLPGSSVC SSAQ

Sequence ? help Back to Top

Protein Sequence Length: 1334 aa Download sequence

MTRVLAPTLP VSNYHFNSLA DADAKGLQAP ALLRSARSGR DSGACPMVAQ SQAEGSTSTS  60
GVNGLIPLAR YNDRASSAFT AYVRPWSASL AGADTAIEPA ATAAASNGGG SCNADPPNRH  120
NHHYSNGHNG HYGHGHNVHG HSQGHGHGHY NSPPTYSRRH DAAGSNGSSG TEDHLQPQQQ  180
HPHQQHQPQH QQPQQHGHAR HLYGAHSALL HARSHAQHGS SSSHHPHHHQ PNPSRRLNEL  240
AAAAAAAASG SGSGSDSPCD GLEKSEDLYD RRRGPSTEND TDPDQDHQHH PDRDTKSASL  300
EPSSNADCDA AEPAAATDSG GGGGGGGGGG GGSDGSGDSG GGSPGQSGHE HAREHGHGQG  360
GQSSDTEQRS APGCGPGSAD GSAVAAAVTM LEMSQAGGRG GSTEDNGGNG ANEATARGSG  420
SGPVSLLASA AAAAAAADAT PAPSPAQQQP QQLLLQQLLA SQQQQQQQQL QQQQQLASAG  480
GAPQPLLDLA TLLSGAGGDN VAQQQQHLQQ QLAVASKEQH QLQQALQHQQ QHLQMLVQMQ  540
QALSSGLPAA LTTGLSGLAP LGGLGALPAL GLGAGGVLGQ ALGLMGPQSL AGPGRLAALL  600
GGVAASAAPA AASSPGSLPP TAAPQQQPQP PVSRLASTLP QQQLGQQPQE QTQLRLPQQD  660
PVPQQPQQPQ QPQQPQQPPQ QQQPQHHLPD PSGPQDSNSS GAAAVAAAPS SHAPSPAPRS  720
PPYKQCTDIT DAALLEDDET DEAEAMEEME DREYDRDSEM TEGDGLEAYL EERMSYSPGE  780
GETDKACQVS LIGAPPLGFG IGASGRGASG GGASADGNGG GGGGGSRGGV KRKASALTDG  840
TSSGGAYNSN GGGSCGEEQN GSPAVDGADA SCKQAPKKPR INWSQELHAR FLNAMFQLGI  900
KNAVPKNILQ LMNVEGLTRE NVASHLQKYR ILLKRHAQLP ANAPLNPENL RKLDVVQQAV  960
QQTMHQSLGS ASLINAAVGG CTLTYQDLLS QLTAMTRHGP APPPAAAAAV PAVAAVAVAP  1020
SAVAATIAAV PPPVAVMALQ GLQRLTAVPL SVAAAAAATA AASGAAAAAG VVGVLAAAAA  1080
GGGSGVVPLP LALCSVPVGG LTTLSALTGL NALTSLTGLN GLNGLNGLNG LNGLNGLSGL  1140
STIGGLNGVL TGLNGIGPLA AAAGLNGIGP LAAAAGLGGL SGIGGLAALP VALGSGLPGA  1200
LPAGLASGLS GLALGPTGLP GLAGLNGLAG LGLSPVLGLG GLSTGTLAAL VANASGAASA  1260
AAAGGGMGAA ERGGGGIRGA AIELPVTAAG ALQLQQLRQL QQLQQQQQLQ QLQQLQLQQQ  1320
GRGLPGSSVC SSAQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59570.1	3e-24	G2-like family protein