PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH06207.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family SBP
Protein Properties Length: 484aa    MW: 48562.5 Da    PI: 6.3133
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH06207.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP99.33.4e-31192274278
                 -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STT......TT-------S--- CS
         SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrr......Lakhnerrrkkqa 78 
                 C+v+gC++dl+ + +y++r++ Cevh ka++++ +g++qrfCqqC+rfhel+efD +krsCr+r      L++hn rrrk+++
  PNH06207.1 192 CHVDGCNTDLTGLSSYYQRYRTCEVHLKATSIIKDGTHQRFCQQCGRFHELNEFDGNKRSCRSRcvgdqgLQSHNVRRRKRTE 274
                 **************************************************************99777777899*******875 PP

Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    
NLLAGLASIL SATTAAVPPG PPPGGLGGPG GSPTIQRTNS GGSGAAAAAA AAAAASAAGM  60
PPGAMLLPGL PFQLPLDNQS LQGLAPFMHL FGPGGLPGLG GDGSMPYSLS IPGVNGQMMP  120
LNLAALLGGN GMDLETMNQM NELAAVGDPS RKSSGAKRPA DGSGGGGYKR ERSEEGRQRE  180
SIPNLPHLKG KCHVDGCNTD LTGLSSYYQR YRTCEVHLKA TSIIKDGTHQ RFCQQCGRFH  240
ELNEFDGNKR SCRSRCVGDQ GLQSHNVRRR KRTEEQMANA GSGGDHGGGS QMGNHNSGMG  300
SQGMQQMGQM PMQQQQMMGG QPNFADIMGG MGAPTLEGIL AALGQQPEDM NNALAQLLAN  360
LPQNFLGGLA PPPDPGQAAL QLALQVAAGG GAEHMAPPLL DSLLKSATGA PGLGPAPGEL  420
AQQDLQQQLA MALAGAPAAA ASIGDEPSDG AAGVVAALAA AAAAAAGHHH GQQDGGGPGD  480
APQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57920.17e-24SBP family protein