PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH05896.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | SBP | ||||||||
Protein Properties | Length: 166aa MW: 18041.2 Da PI: 4.8425 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 30.8 | 7.9e-10 | 105 | 134 | 2 | 31 |
-SSTT-----TT--HHHHHTT--HHHHT-S CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskap 31 Cqv gC + l+ +k y+ rh+vCe hsk + PNH05896.1 105 CQVAGCGQSLEGMKGYFLRHRVCEEHSKRK 134 ***************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence |
MDGDLHVGEL WDLDTQHTEL GWTLAGYRWD PVGLVATKRT AEAAALQVNL ERFSGGDSGG 60 THEHYDPGME LEPHEDGDNS CLDPDVLAAA PVYLPQPAGC KSLLCQVAGC GQSLEGMKGY 120 FLRHRVCEEH SKRKRKAQPP HRMVFLDPDG GGDAFLPAAP FFVSLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69170.1 | 2e-06 | SBP family protein |