PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH05433.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

SBP

Protein Properties

Length: 2283aa MW: 222505 Da PI: 6.484

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH05433.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	77.1	2.8e-24	15	83	1	69
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakh 69 +Cq+++C+ l++ k y++r+k+Ce h k+p+++++g+ r CqqC+rfh+l f+ +kr+Cr++L++ PNH05433.1 15 MCQIQDCNRSLQNSKLYYQRFKLCEEHLKSPAIIIDGVLSRLCQQCGRFHDLAAFEGKKRTCRQQLDRI 83 6*****************************************************************974 PP

Sequence ? help Back to Top
Protein Sequence Length: 2283 aa Download sequence
MSRPPVGAAK QQRLMCQIQD CNRSLQNSKL YYQRFKLCEE HLKSPAIIID GVLSRLCQQC 60 GRFHDLAAFE GKKRTCRQQL DRIRNAKLAR KRNASGSDSP SQDMEVDLEG GPGMGMGMGM 120 SMGMGMGMGM GMGLHGAGEA GGGQGARGGR RGGSKGDVAE VNAGAMRDAE KRRGPSGSGA 180 SGVSGGSSAS ADAGRRAGGD VIGGVGGVAL GIGGPPYGTE QHTSGTGLAL SLAGLYGCAV 240 AAGGGSGRWG LGGSQEGIRE MLSVEGGLGA GGGPSGLPTA PSGASGTSGS SGGGGGGGGG 300 RTTSPESSTG AGALTGTAPG HVTDAAPQLM AAAPQLHVRQ TQQLPPQQAQ QHPRQHLPYS 360 LQAQYQQQQQ QQLVGGGTGG GAATAAAASG LAPLRAPTAG GPDSEAWRAQ LPGRGPGQGQ 420 RLPLCGRAGG AGGGESGHMM PGLAPAAAPQ PAAAMPGAAG AAGADPGRRH ASLATPLWAD 480 YPGLGTGMGA AGSQAAAPGR SLHHLGAPGY AAAPAGYGFA AAAPAGARHP GLGGGLSAGP 540 AAGRKGGALH PGGPGSGPLE VELEALLGEL RQTAHAADYR TMAGGPTLLL GGGSDPVTAA 600 PLAPGAAAAA GPLPPLIPAA APPPGSGAAA FGGGAAPPGP LAPGITAAAA ALLGTTGAAS 660 RRRGGGGGEG RSGSSADLMD IYDAMVHGGM LSSTSTSTSL VAAAAGLLDS AEVEAAMAAQ 720 QPPPQQPQRR QGQEQDLGQE QEQGQPPQPR GEAVDAVDGS GPAADSSSAG GGGGDEALGR 780 LAVQLSPQMP CGLLLLEARR GRLLGPQWWP VVVVPEADVA NELNGLMQAV ARGGAEEGQH 840 GASSPGLRAF LVDLGQMLDW AGRAGARVGA GSAGAAAVAA GFPRVEAVAE EAEEEEAQRE 900 EWREAEEESE EESEGESEES EEEGEGGGEQ RVGSEAGTGT TAVAEECAWG SGPGSDGSIG 960 AAAAKRAQQG GDDTAAAATT AAATAAGPPP PPAPSQPSPP PARAALSYDS SSVATADHSW 1020 AQSRGSTFGG GGVGGGSRSA GNTLSSNDDS GSGGGGGSGG WNSRALGVVR DADVSLQRRL 1080 SYKGCRLLAF CVTRGLPTAP SGASGTSGSS GGGGGGGGGR TTSPESSTGA GALTGTAPGH 1140 VTDAAPQLMA AAPQLHVRQT QQLPPQQAQQ HPRQHLPYSL QAQYQQQQQQ QLVGGGTGGG 1200 AATAAAASGL APLRAPTAGG PDSEAWRAQL PGRGPGQGQR LPLCGRAGGA GGGESGHMMP 1260 GLAPAAAPQP AAAMPGAAGA AGADPGRRHA SLATPLWADY PGLGTGMGAA GSQAAAPGRS 1320 LHHLGAPGYA AAPAGYGFAA AAPAGARHPG LGGGLSAGPA AGRKGGALHP GGPGSGPLEV 1380 ELEALLGELR QTAHAADYRT MAGGPTLLLG GGSDPVTAAP LAPGAAAAAG PLPPLIPAAA 1440 PPPGSGAAAF GGGAAPPGPL APGITAAAAA LLGTTGAASR RRGGGGGEGR SGSSADLMDI 1500 YDAMVHGGML SSTSTSTSLV AAAAGLLDSA EVEAAMAAVG GSVSGGGSAG AGSSTHSRQA 1560 MQQHLHQHHQ HHQHQLQLQL QAAATYQQQQ QPPQHQQPPQ QHHQQHHQQQ HQQQHQQQHQ 1620 HHQHHQHHQH HQQLDGVARA DAYPSAGRRH TAGGGAGAAS SNTSGNGARG SGGSLEEGSP 1680 YNAIAAHTPP TYVARDALTR VTLKMMSCLP EELPPALRAN MQRWVAAGAA AEAVAEEAAE 1740 EEAAQREEWR EAEEESEEES EGESEESEEE GEGGGEQRVG SEAGTGTTAV AEECAWGSGP 1800 GSDGSIGAAA AKRAQQGGDD TAAAATTAAA TAAGPPPPPA PSQPSPPPAR AALSYDSSSV 1860 ATADHSWAQS RGSTFGGGGV GGGSRSAGNT LSSNDDSGSG GGGGSGGWNS RALGVVRDAD 1920 VSLQRRLSYK GCRLLAFCVT RGMIYTAALL WRLLALRGMP LGAVLDHAVS YEGEGLLACA 1980 VRSRSRAMLL ALLAQMGARH WGVWSERELS RLGPTGVSPL HLAASLPGGA DIAAALLELV 2040 PAAPGLWLRM ADAGGVTPAT LAARGGGAAG LALAECAAEL LRAQQPEVTW GSDMGSGSGS 2100 VACEGGGTPG MQGGGRARGE PAAEAGGGAC GWGEAAATLQ QRQQAQAAPP AARVEGTGER 2160 SGDVAPQAPG APLSPAAARA AAGARVAEAA AASMAALRLA EAAPRAAAVE PRLGAAAPAA 2220 SAAAAAPSAP SPAAAAAPAA APAAAAPEGE RPRGKLSGWL RNLVGKSGGR GKGAGPGAGR 2280 GGK

Sequence ? help Back to Top

Protein Sequence Length: 2283 aa Download sequence

MSRPPVGAAK QQRLMCQIQD CNRSLQNSKL YYQRFKLCEE HLKSPAIIID GVLSRLCQQC  60
GRFHDLAAFE GKKRTCRQQL DRIRNAKLAR KRNASGSDSP SQDMEVDLEG GPGMGMGMGM  120
SMGMGMGMGM GMGLHGAGEA GGGQGARGGR RGGSKGDVAE VNAGAMRDAE KRRGPSGSGA  180
SGVSGGSSAS ADAGRRAGGD VIGGVGGVAL GIGGPPYGTE QHTSGTGLAL SLAGLYGCAV  240
AAGGGSGRWG LGGSQEGIRE MLSVEGGLGA GGGPSGLPTA PSGASGTSGS SGGGGGGGGG  300
RTTSPESSTG AGALTGTAPG HVTDAAPQLM AAAPQLHVRQ TQQLPPQQAQ QHPRQHLPYS  360
LQAQYQQQQQ QQLVGGGTGG GAATAAAASG LAPLRAPTAG GPDSEAWRAQ LPGRGPGQGQ  420
RLPLCGRAGG AGGGESGHMM PGLAPAAAPQ PAAAMPGAAG AAGADPGRRH ASLATPLWAD  480
YPGLGTGMGA AGSQAAAPGR SLHHLGAPGY AAAPAGYGFA AAAPAGARHP GLGGGLSAGP  540
AAGRKGGALH PGGPGSGPLE VELEALLGEL RQTAHAADYR TMAGGPTLLL GGGSDPVTAA  600
PLAPGAAAAA GPLPPLIPAA APPPGSGAAA FGGGAAPPGP LAPGITAAAA ALLGTTGAAS  660
RRRGGGGGEG RSGSSADLMD IYDAMVHGGM LSSTSTSTSL VAAAAGLLDS AEVEAAMAAQ  720
QPPPQQPQRR QGQEQDLGQE QEQGQPPQPR GEAVDAVDGS GPAADSSSAG GGGGDEALGR  780
LAVQLSPQMP CGLLLLEARR GRLLGPQWWP VVVVPEADVA NELNGLMQAV ARGGAEEGQH  840
GASSPGLRAF LVDLGQMLDW AGRAGARVGA GSAGAAAVAA GFPRVEAVAE EAEEEEAQRE  900
EWREAEEESE EESEGESEES EEEGEGGGEQ RVGSEAGTGT TAVAEECAWG SGPGSDGSIG  960
AAAAKRAQQG GDDTAAAATT AAATAAGPPP PPAPSQPSPP PARAALSYDS SSVATADHSW  1020
AQSRGSTFGG GGVGGGSRSA GNTLSSNDDS GSGGGGGSGG WNSRALGVVR DADVSLQRRL  1080
SYKGCRLLAF CVTRGLPTAP SGASGTSGSS GGGGGGGGGR TTSPESSTGA GALTGTAPGH  1140
VTDAAPQLMA AAPQLHVRQT QQLPPQQAQQ HPRQHLPYSL QAQYQQQQQQ QLVGGGTGGG  1200
AATAAAASGL APLRAPTAGG PDSEAWRAQL PGRGPGQGQR LPLCGRAGGA GGGESGHMMP  1260
GLAPAAAPQP AAAMPGAAGA AGADPGRRHA SLATPLWADY PGLGTGMGAA GSQAAAPGRS  1320
LHHLGAPGYA AAPAGYGFAA AAPAGARHPG LGGGLSAGPA AGRKGGALHP GGPGSGPLEV  1380
ELEALLGELR QTAHAADYRT MAGGPTLLLG GGSDPVTAAP LAPGAAAAAG PLPPLIPAAA  1440
PPPGSGAAAF GGGAAPPGPL APGITAAAAA LLGTTGAASR RRGGGGGEGR SGSSADLMDI  1500
YDAMVHGGML SSTSTSTSLV AAAAGLLDSA EVEAAMAAVG GSVSGGGSAG AGSSTHSRQA  1560
MQQHLHQHHQ HHQHQLQLQL QAAATYQQQQ QPPQHQQPPQ QHHQQHHQQQ HQQQHQQQHQ  1620
HHQHHQHHQH HQQLDGVARA DAYPSAGRRH TAGGGAGAAS SNTSGNGARG SGGSLEEGSP  1680
YNAIAAHTPP TYVARDALTR VTLKMMSCLP EELPPALRAN MQRWVAAGAA AEAVAEEAAE  1740
EEAAQREEWR EAEEESEEES EGESEESEEE GEGGGEQRVG SEAGTGTTAV AEECAWGSGP  1800
GSDGSIGAAA AKRAQQGGDD TAAAATTAAA TAAGPPPPPA PSQPSPPPAR AALSYDSSSV  1860
ATADHSWAQS RGSTFGGGGV GGGSRSAGNT LSSNDDSGSG GGGGSGGWNS RALGVVRDAD  1920
VSLQRRLSYK GCRLLAFCVT RGMIYTAALL WRLLALRGMP LGAVLDHAVS YEGEGLLACA  1980
VRSRSRAMLL ALLAQMGARH WGVWSERELS RLGPTGVSPL HLAASLPGGA DIAAALLELV  2040
PAAPGLWLRM ADAGGVTPAT LAARGGGAAG LALAECAAEL LRAQQPEVTW GSDMGSGSGS  2100
VACEGGGTPG MQGGGRARGE PAAEAGGGAC GWGEAAATLQ QRQQAQAAPP AARVEGTGER  2160
SGDVAPQAPG APLSPAAARA AAGARVAEAA AASMAALRLA EAAPRAAAVE PRLGAAAPAA  2220
SAAAAAPSAP SPAAAAAPAA APAAAAPEGE RPRGKLSGWL RNLVGKSGGR GKGAGPGAGR  2280
GGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53160.1	4e-17	SBP family protein