PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH04900.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | E2F/DP | ||||||||
Protein Properties | Length: 254aa MW: 27238.2 Da PI: 4.8248 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 87 | 1.3e-27 | 78 | 143 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL++lt+kfl+l++++ +gi++ln++a++L +v ++RRiYDi+NVLe+++liekk+kn+irwkg PNH04900.1 78 RYDSSLGMLTKKFLTLINNAADGILDLNKAAETL---KV--QKRRIYDITNVLEGVGLIEKKSKNNIRWKG 143 6899******************************...88..****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MAWGLFPSQV DSGDEDEDPH HQLEQEQDHD EEQEESYGGD GAGDDSADDM EQRTPSRGVK 60 RKAGRGAGSP GSLTSGCRYD SSLGMLTKKF LTLINNAADG ILDLNKAAET LKVQKRRIYD 120 ITNVLEGVGL IEKKSKNNIR WKGAAGGGGC DGAEAEPEAL RLKNDVLSLM DPERSPSAPR 180 RRGGALPLAL DITRTVAALL EARLEPPELT CGVGPESLPP AGHLSPRRVL EDRGARGLGP 240 EHHHTAPLRG EEEA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 111 | 117 | LKVQKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22220.3 | 9e-31 | E2F/DP family protein |